Arvicanthis niloticus (African grass rat): 117711804
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Entry
117711804 CDS
T08817
Symbol
Cacna1g
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G isoform X1
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04010
MAPK signaling pathway
anu04020
Calcium signaling pathway
anu04713
Circadian entrainment
anu04925
Aldosterone synthesis and secretion
anu04927
Cortisol synthesis and secretion
anu04929
GnRH secretion
anu04930
Type II diabetes mellitus
anu04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117711804 (Cacna1g)
04020 Calcium signaling pathway
117711804 (Cacna1g)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
117711804 (Cacna1g)
04925 Aldosterone synthesis and secretion
117711804 (Cacna1g)
04927 Cortisol synthesis and secretion
117711804 (Cacna1g)
09159 Environmental adaptation
04713 Circadian entrainment
117711804 (Cacna1g)
09160 Human Diseases
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
117711804 (Cacna1g)
04934 Cushing syndrome
117711804 (Cacna1g)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117711804 (Cacna1g)
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117711804 (Cacna1g)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117711804
NCBI-ProteinID:
XP_034363585
LinkDB
All DBs
Position
6:27947056..28013077
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AA seq
2388 aa
AA seq
DB search
MDEEDDGAGAEESGQPRSFTRLNDLSGAGGRQGPGSTEKDPGSADSEAEGLPYPALAPVV
FFYLSQDSRPRSWCLRTVCNPWFERVSMLVILLNCVTLGMFRPCEDIACDSQRCRILQAF
DDFIFAFFAVEMVVKMVALGIFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAVR
TVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNR
CFLPENFSLPLSVDLEPYYQTENEDESPFICSQPRENGMRSCRSVPTLRGEGGGGPPCGL
DYEAYNSSSNTTCVNWNQYYTNCSAGEHNPFKGAINFDNIGYAWIAIFQVITLEGWVDIM
YFVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRESQLMREQRVRFLSNA
STLASFSEPGSCYEELLKYLVYILRKAARRLAQVSRAVGVRAGLLSSPVARGGQEPQPSG
SCSRSHRRLSVHHLVHHHHHHHHHYHLGNGTLRVPRASPEIQDRDANGSRRLMLPPPSTP
TPSGGPPRGAESVHSFYHADCHLEPVRCQAPPPRSPSEASGRTVGSGKVYPTVHTSPPPE
MLKDKALMEVAPSPGPPTLTSFNIPPGPFSSMHKLLETQSTGACHSSCKISSPCSKADSG
ACGPDSCPYCARTGAGEPESADHEMPDSDSEAVYEFTQDAQHSDLRDPHSRRRRSLGPDA
EPSSVLAFWRLICDTFRKIVDSKYFGRGIMIAILVNTLSMGIEYHEQPEELTNALEISNI
VFTSLFALEMLLKLLVYGPFGYIKNPYNIFDGVIVVISVWEIVGQQGGGLSVLRTFRLMR
VLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFASERDGDTL
PDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSSWAALYFIALMTFGNYVLFNLLV
AILVEGFQAEEIGKREDTSGQLSCIQLPVNSQGGDATKSESEPDFFSPSMDGDGDRKKRL
ALVALGEHAELRKSLLPPLIIHTAATPMSLPKSSSTGVGEALGSGSRRTSSSGSAEPGAA
HHEMKSPPSARSSPHSPWSAASSWTSRRSSRNSLGRAPSLKRRSPSGERRSLLSGEGQES
QDEEESSEEDRASPAGSDHRHRGSLEREAKSSFDLPDTLQVPGLHRTASGRSSASEHQDC
NGKSTSGRLARTQGTDDPPLDGDDGDDEGNLSKGERIRAWVRARLPACCRERDSWSAYIF
PPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAMERPKIDPHSAERIFLTLSNYIFTA
VFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILGMLRV
LRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFKGKFF
VCQGEDTRNITNKSDCAEASYRWVRHKYNFDNLGQALMSLFVLASKDGWVDIMYDGLDAV
GVDQQPIMNHNPWMLLYFISFLLIVAFFVLNMFVGVVVENFHKCRQHQEEEEARRREEKR
LRRLEKKRRSKEKQMADLMLDDVIASGSSASAASEAQCKPYYSDYSRFRLLVHHLCTSHY
LDLFITGVIGLNVVTMAMEHYQQPQILDEALKICNYIFTVIFVLESVFKLVAFGFRRFFQ
DRWNQLDLAIVLLSIMGITLEEIEVNASLPINPTIIRIMRVLRIARVLKLLKMAVGMRAL
LDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLECDETHPCEGLGRHATFRNFGMAF
LTLFRVSTGDNWNGIMKDTLRDCDQESTCYNTVISPIYFVSFVLTAQFVLVNVVIAVLMK
HLEESNKEAKEEAELEAELELEMKTLSPQPHSPLGSPFLWPGVEGVNSPDSPKPGVPHTT
AHIGAASGFSLEHPTDRQLFDTISLLIQGSLEGELKLMDELAGPGGQPSAFPSAPSTGDS
DPQIPLAEMEALSLTSEIVSEPSCSLALTDDSLPDDTHTLLLSALESNMVPHPEEVPVPL
GPDLLTVRKSGVSRTHSLPNDSYMCRNGSTAERSLGHRGWGLPKAQSGSILSVHSQPADT
SCILQLPKDAHYLLQPHGVPTWGAIPKLPPPGRSPLAQRPLRRQAAIRTDSLDVQGLGSR
EDLLSEVSGPSCPLTRSSSFWGGSSIQVQQQRFSSQSQVSKHIRPPAPCPGLEPSWAKDP
PETRSSLELDTELSWISGDLLPSSQEEPLSPRDLKKCYSVEAQSCRRRPGSWLDEQRRHS
IAVSCLDSGSQPRLCPSPSSLGGQPLGGPGSRPKKKLSPPSISIDPPESQNPRPPCSPGV
CLRRRAPASDSKDPSASSPLDSTAASPSPKKDALSLSGLSSDPTDLDP
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggatgatggagcgggcgccgaggagtcgggacagccccggagcttcacg
cggctcaacgacctgtccggggccgggggacggcaggggccggggtcgacggaaaaggac
ccgggcagcgcggactccgaggcggaggggctgccgtacccggcgctggccccggtggtt
ttcttctacttgagccaggacagccgcccgcggagctggtgtctccgcacggtctgtaac
ccttggttcgagcgagtcagtatgctggtcattcttctcaactgtgtgactctgggtatg
ttcaggccgtgtgaggacattgcctgtgactcccagcgctgccggatcctgcaggccttt
gatgacttcatctttgccttctttgctgtggaaatggtggtgaagatggtggccttgggc
atctttgggaagaaatgttacctgggagacacttggaaccggcttgactttttcatcgtc
attgcagggatgctggagtattcgctggacctgcagaacgtcagcttctccgcagtcagg
acagtccgtgtgctgcgaccgctcagggccattaaccgggtgcccagcatgcgcatcctt
gtcacattactgctggataccttgcctatgctgggcaatgtcctgctgctctgtttcttc
gtctttttcatctttggcatcgttggtgtccagctgtgggcagggctgcttcgaaaccga
tgcttcctccctgagaatttcagcctccccctgagcgtggacctggagccttactaccag
acagagaatgaggacgagagccccttcatctgctctcagcctcgggagaatggtatgcga
tcctgcaggagcgtgcccacactgcgtggggaaggcggcggtggcccaccctgcggtctg
gactacgaggcctataacagttccagcaataccacctgcgtcaactggaaccaatactat
accaactgctctgcaggcgagcacaaccccttcaaaggcgccatcaactttgacaacatt
ggctacgcctggatcgccatcttccaggttatcacactggagggctgggtcgacatcatg
tactttgtaatggatgctcactccttctacaacttcatctacttcattcttctcatcatc
gtgggctccttcttcatgatcaacctgtgcctggtggtgattgccacgcagttctccgag
accaagcagcgagagagtcagctgatgcgggagcaacgtgtacgattcctgtccaatgct
agcaccctggcaagcttctctgagcccggcagctgctatgaggagctactcaagtacctg
gtgtacatcctccgcaaagcagcccgcaggctggcccaggtctctagggctgtaggcgtg
cgggctgggttgctcagcagcccagtggcccgtggtgggcaggagccccagcccagtggc
agctgctctcgttcacaccgtcgtctgtctgtccaccacctggtacaccaccatcaccac
caccatcaccactaccacctgggtaatgggacgctcagagttccccgggccagcccagag
atccaggacagggatgccaatgggtcccgccggctcatgctaccaccaccctctaccccc
actccctctggaggccctccgaggggtgcggagtctgtacacagcttctaccatgctgac
tgccacttggagccagtccgttgccaggcaccccctcccaggtccccatcggaggcatct
ggcaggactgtgggtagtgggaaggtataccccactgtgcataccagccctccaccagag
atgctgaaggataaggcactaatggaggtggcccccagccctgggccccccaccctcacc
agcttcaacatcccacctgggcccttcagctccatgcacaagctcctggagacacagagt
acgggagcctgccatagctcctgcaaaatctccagcccttgctccaaggcagacagtgga
gcctgtgggccggacagttgtccctactgcgcccggacaggagcaggggagccagagtcc
gctgatcatgaaatgcctgactcagacagtgaggccgtgtatgagttcacacaggatgct
caacacagtgacctccgggatccccacagccggcgacggcggagcctgggcccagatgca
gagcctagttctgtgctggccttctggaggctgatctgtgatacgttccggaagatcgta
gatagcaaatactttggtcggggaatcatgatcgctatcctggtcaataccctcagcatg
ggcatcgagtaccacgagcagcccgaagagctcaccaacgccctggaaatcagcaacatc
gtcttcaccagcctctttgccttggagatgctgctgaagctgctcgtctatggtcccttt
ggctacattaagaatccctacaacatctttgatggcgtcattgtggtcatcagcgtgtgg
gagattgtgggccagcagggaggtggcctgtcagtgctgcggaccttccgcctgatgcgg
gtgctgaagctagttcgcttcctgccggcactgcagcggcagctcgtggtgctcatgaag
accatggacaacgtggccaccttctgcatgcttctcatgctcttcatcttcatcttcagc
atcctgggcatgcatctctttggttgcaagtttgcatctgaacgggatggggacacgttg
ccagaccggaagaattttgactccctgctctgggccatcgtcactgtctttcagattctg
actcaggaagactggaataaagtcctctacaacggcatggcctccacatcatcttgggct
gctctttacttcatcgccctcatgacctttggcaactacgtgctctttaacctgcttgtc
gccattcttgtggagggcttccaggcagaggaaatcggcaaacgggaagatacgagtgga
cagttaagctgtattcagctgcctgtcaactcccaggggggagatgccaccaagtctgag
tcagagcctgatttcttttcgcccagcatggatggtgatggggacagaaagaagcgcttg
gccctggtggccttgggagagcacgcggaactacgaaagagccttttgccacctctcatc
atccacacagctgctacaccaatgtcactgcccaagagctccagcacaggtgtgggggaa
gcattgggctctggctctcgtcgcaccagtagcagtgggtccgctgagcctggagctgcc
catcacgagatgaaatcgccgccaagtgcccgaagctccccacacagtccctggagtgca
gcaagcagctggaccagcaggcgctccagccggaacagcctgggccgggcccccagccta
aagcgtaggagcccgagtggggagcggaggtccctgctgtctggagagggtcaagagagc
caggatgaggaggaaagttcagaagaggaccgggccagcccagcaggcagtgatcatcgc
cacaggggttccttggaacgggaggccaagagttcctttgacctgcctgacacccttcag
gtgccggggctgcaccgcacagccagtggccggagctctgcctctgaacaccaagactgt
aatggcaagtcgacttcagggcgtttggcccgtacccaggggactgatgaccccccactg
gatggggacgatggtgatgatgagggcaacctgagcaaaggggagcgcatacgagcctgg
gtcagagcccggctccctgcctgttgccgagagcgagattcctggtctgcctatatcttc
cctcctcagtcaaggtttcgtctcctgtgtcaccggatcattacccacaagatgtttgac
catgtggtcctcgtcatcatcttcctcaactgtatcaccatcgccatggagcgccccaaa
attgacccccacagcgctgagcgcatctttctgaccctctccaactacatcttcacggca
gtttttctggctgaaatgacagtgaaggtggtggcactgggctggtgctttggggagcag
gcctacctgcgcagcagctggaatgtgctggatggcttgctggtgctcatctccgtcatc
gacatcctggtatccatggtctctgacagcggcaccaagatcctcgggatgctgagggtg
ctgcgactgctgcggaccctacgtccactcagggtcatcagccgggcccaggggctgaag
ctggtggtggagactctgatgtcatccctcaaacccatcggcaacattgtggtcatctgc
tgtgccttcttcatcatttttggaattcttggggtgcagctcttcaaagggaagttcttc
gtgtgtcagggtgaggacaccaggaacatcactaacaaatctgactgtgctgaggccagt
taccggtgggtccggcacaagtacaactttgacaacctgggccaggctctgatgtccctg
tttgtgctggcctccaaggatggttgggttgacatcatgtatgatgggctggatgctgtg
ggtgtggaccagcagcccatcatgaaccacaacccctggatgttgctgtacttcatctcc
ttcctcctcatcgtggccttctttgtcctgaacatgtttgtgggcgtggtggtggagaac
ttccataagtgcaggcagcaccaggaggaggaggaggcacggcggcgtgaggagaagcga
ctacggaggctggaaaaaaagagaaggagtaaggagaagcagatggccgatctaatgttg
gacgatgtaattgcttccggcagctcagccagcgctgcgtcagaagcccagtgcaagccc
tactactctgactactcccgcttccgactccttgtccaccacctgtgtaccagccactac
ctggacctcttcatcactggtgtcattgggctgaatgtggtcactatggccatggaacat
taccagcagccccagatcctggacgaggctctgaagatctgcaattacatcttcaccgtc
atctttgtcttggagtcagttttcaaacttgtggcctttggcttccgccgattcttccag
gacagatggaaccagctggacctggctattgtgcttctgtccatcatgggcatcacactg
gaggagattgaggttaatgcctcgctgcccatcaaccccaccatcatccgtatcatgagg
gtgctccgcattgctcgagttctgaagctgttgaagatggctgtgggcatgcgggcactg
ctggacacggtgatgcaggccctgccccaggtggggaacctgggacttctcttcatgcta
ttatttttcatctttgcagctctgggcgtggagctctttggagacctggagtgtgatgag
acacacccttgtgagggcttgggccggcatgccacctttaggaactttggtatggccttt
ctgaccctcttccgagtctccactggtgacaactggaatggtattatgaaggacaccctc
cgggattgtgaccaggagtccacctgctataacaccgtcatctcccctatctacttcgtg
tccttcgtgctgacggcccagtttgtgctggtcaacgtggtcatagccgtgctgatgaaa
cacctggaagaaagcaacaaagaggccaaggaggaagccgagctggaggccgagctggag
ctggagatgaagacactcagcccgcagccccattccccgctgggcagccccttcctctgg
cctggggtggagggtgtcaatagccctgacagccctaagcctggggttccacacaccacc
gcccacattggagcagcctcgggcttctcccttgagcaccccacggacagacagctgttt
gacaccatctccctgctgatccagggctccctggagggggagctgaagctgatggacgag
ctggcaggcccagggggccagccctctgccttcccttccgcccccagcacgggcgactcc
gacccacagatccctctagctgagatggaggctctgtctctgacgtcagagattgtgtct
gaaccgtcctgctctctagctctgacggatgactctttgcctgatgacactcacacactc
ttacttagtgccctggagagcaatatggtaccccaccctgaggaggtgccagtcccccta
ggaccagacctgctgactgtgaggaagtctggtgtcagccggacacactctctgcccaat
gacagctacatgtgccgtaatgggagcactgccgagagatccctaggacacaggggctgg
gggctccccaaagcccagtcaggctccatcttgtctgttcactcccaaccagcagacacc
agctgcatcctacaacttcccaaagatgcacactatctgctccagcctcatggggtcccc
acttggggtgccatccctaaactacccccacctggccgctcccctctggctcaaaggcct
ctcaggcgccaggcagcaataaggactgactccctggacgttcagggcctgggtagccgg
gaagacctgttgtcagaggtgagtgggccctcttgccctctgacccggtcctcatccttc
tggggcgggtcgagcatccaggtgcagcagcagcggttcagcagccagagccaagtctcc
aagcacatccgcccgccagccccttgcccaggcctggaacccagctgggccaaggaccct
ccagagaccagaagcagcttagagctggacacggagctgagctggatttcaggagacctc
ctgcccagcagccaggaagaacccctgtccccacgggacctgaagaagtgctacagtgta
gaggcccagagctgccggcgcaggcctgggtcctggctagatgaacagaggagacactcc
attgctgtcagctgcctggacagcggctcccaaccccgcctatgtccaagtccctcaagc
ctcgggggccaacctcttgggggccctgggagccggcctaagaaaaaactcagcccaccc
agtatctctatagatcccccggagagccagaaccctcgacccccatgcagtcctggtgtc
tgcctcaggaggagggcgccggccagtgactccaaggatccctcggcctccagccccctt
gacagcacggctgcctcaccttccccaaagaaagatgcgctgagtctctctggtttgtct
tctgacccaacagacctggacccctga
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integrated database retrieval system
