Arvicanthis niloticus (African grass rat): 117711810
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Entry
117711810 CDS
T08817
Symbol
Nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117711810 (Nlrc3)
Pattern recognition receptors [BR:
anu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117711810 (Nlrc3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
AAA_16
NPHP3_N
AAA_25
AAA_19
AAA
AAA_14
Motif
Other DBs
NCBI-GeneID:
117711810
NCBI-ProteinID:
XP_034363606
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All DBs
Position
6:complement(92954284..92971803)
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AA seq
1061 aa
AA seq
DB search
MRKQEVWTDRQTCLAYNAGSPAEQVKTLVELLAGKGSQLLQAHNKMPDPPLGSQSNESRL
RKHCEALLSRVGNDPELGSPSHRLASLMLVEGLTDLQLKEHDFTQVEATRGVWRPARAIT
LDRLFLPLSRVSIPPRVSLTIGVAGVGKTTLVRHFVRCWARGQVGKGFSWVLPLTFRDLN
TYEKLSADRLISMFSNAGETNLAVTAPDRVLLVLDGLDECKTPLEFSNTMACTDPKKEIQ
VDHLITNIIRGNLFPEISVWITSRPSAAGQIPGGLVDRMTEIRGLTEEEIKVCLKQIFPE
DQNLLGQILSQVQANRALYRMCTIPAFCRLMGLALGHLYRTRLAVQDRELPLPQTLCELY
SWYFRMALGGEGQDKGKVSPRIEQVTQGARKMVGTLGRLAFHGLVKKKYVFYEQDMKAFG
VDLALLQSTLCSCLLQREETLASSVAYCFSHLSLQEFVAATYYYSASRRAIFDLFTESGM
SWPRLGFLAHFRCAAQRATQAKDGRLDVFLRFLSGLLSPRVNTLLAGSLLAQGEHQSYRD
QVAEVLQGFLHPDTAVCSRAINVLYCLSELRHTELARSVEEAMRSGTLAEMTSPSHRTAL
AYLLQISDICSQEADFSLCLSQRVLQSLLPQLLYCQILRLDNNQFQDPVMELLGSVLSGK
DCRIQKISLAENQIGSKGAKALARALLVNRSLVTLDLRSNCIGPQGAKALADALKINRTL
ASLSLQSNVIKDDGVLCMAEALVSNQTISILQLQNNLIGPIGAQQMADALKQNRSLKELM
FSSNTIGDRGAMALAEALKVNQGLENLDLQSNAISNTGVAVLMQALCSNHTLSSLNLREN
SISPEGAQALAQALCTNSTLKHLDLTANLLHDQGAQAIAVAVGENHSLTHLHLQWNFIQA
GAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSRGAQ
ALGEALAVNRTLEILDLRGNDVGVAGAKALANALKLNSSLRRLNLQENSVGMDGAIYVAT
ALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEM
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcaagaggtgtggacagatagacagacatgcctggcctacaatgctggctcc
ccagctgagcaggtgaaaacccttgtggaactgttggctgggaagggcagtcagctgcta
caggcccataacaaaatgccagaccccccactgggatcccaaagcaatgagtcaaggcta
cggaagcactgtgaggccctgctaagcagggtgggaaatgacccagaactgggcagcccc
tcacaccggctggccagcctcatgctggtagagggcctgacagacctgcagctaaaggag
catgacttcacacaggtggaggccacacgtggggtctggcgccctgccagagccatcacc
ctggacaggctcttcctgcctctgtcccgggtatccatcccacctcgagtctctctcacc
attggagtggctggcgtgggcaaaaccactctggtgaggcattttgttcgttgctgggcc
agaggacaagtgggcaagggcttctcatgggttctgcccttaacctttcgcgatcttaac
acctatgagaaactgtctgcagacagactcatctccatgttctcaaacgctggggaaact
aatctggcggtgacagccccagacagagtcctcttggtcctggatggcttggatgagtgt
aagacacccctggaattctccaataccatggcctgcacagacccaaagaaggagatccag
gtagaccacctgatcactaacatcatccgaggcaacctctttccagaaatttctgtctgg
atcacttcccggcccagtgctgctggtcagatccctgggggcctagtggaccggatgact
gagattcggggccttactgaggaagagatcaaggtgtgtctgaagcagatatttccggag
gaccagaacctcttaggtcagattctgagtcaagtacaggccaacagggctctgtatcgg
atgtgcaccataccagccttttgcaggctcatggggctggcactgggtcacttataccgc
accaggctggctgtccaagacagagagctgccgttgcctcagaccctgtgtgagctatac
tcttggtacttcaggatggctcttggtggggaggggcaggataagggaaaggtaagtcct
aggatcgagcaggtgacccagggagctcgcaaaatggtggggacattgggccgcctggcc
ttccatgggctggtcaagaagaaatacgtgttttatgagcaagacatgaaggcgtttgga
gtggaccttgctctgctgcagagcactttgtgcagctgcctcctgcagcgggaagagacc
ctggcctcctcggtggcttactgcttcagtcacctatctctgcaagaatttgtggcggct
acgtattactatagtgcatccaggagggccatctttgacctcttcaccgagagtggcatg
tcctggcccaggttgggtttcctcgcccatttcagatgtgcagcccagcgggccacacaa
gctaaggatgggaggctggatgtgttcctgcgcttcctctctggcctcttatccccaagg
gtcaatactctgttggccggctccctgttggcccagggtgagcatcagagctaccgagac
caggtggctgaggtcctccaaggcttcctacatcctgacactgcagtctgttcacgcgcc
atcaatgtcttgtactgcctgagtgagcttcggcacacagaactggcccgcagtgtggag
gaggccatgcggagtgggaccttggctgagatgaccagcccttcacaccgcactgctctg
gcctacctcctgcagatatctgatatctgctcccaggaggctgacttctccctgtgcctc
agccagcgtgtcctccagagcctgcttcctcaactgctctattgtcagatcctcaggctg
gacaacaaccagttccaggaccccgtgatggagttgctgggcagtgtgctgagtgggaaa
gattgtcgtattcaaaagatcagcctggctgagaaccagattggcagcaaaggggccaaa
gcgctggccagagccctgctggtcaacaggagcctcgtcacactggacctccggagtaac
tgcattggaccacagggggctaaggctctggcagatgctctgaagataaaccgaactcta
gcttctctaagcctccaaagcaacgtgatcaaggatgatggtgtcctgtgcatggctgag
gccctggtctccaaccagactatctccatactacagctacagaacaacctaattgggccc
ataggagcccagcagatggcagatgccctgaagcagaacaggagtctgaaagaactcatg
ttttccagtaataccattggggacagaggtgccatggccctggctgaggccctgaaggtg
aaccagggcctagagaacctggacctccagagcaatgccatcagtaacacgggagtggcg
gtgctgatgcaagccctctgcagtaaccatacactgtccagtctcaacctaagagaaaac
tccatcagcccagagggagcccaggcccttgctcaagccctctgcacgaacagcactctg
aagcacttggacctgacagctaatctcctccatgaccaaggtgcccaggccattgcagta
gcagtgggagaaaaccactccctcacacaccttcacctgcagtggaacttcattcaggct
ggtgcagccagggccctgggacaagcactccagctgaacaggaccctgacaaccttagat
ttacaggagaatgccataggggatgaaggagcttcctcagtggctggcgcactgaaggtg
aacacaaccctcactgctctctacctacaggtggcttccattggtagccgaggggcccag
gcacttggggaggccctagctgtgaacagaaccttggagattcttgacttacgaggaaac
gacgttggggtagctggagccaaggccttggcaaacgctctgaagttaaactctagtctt
agaagactcaatctccaagagaactcagtggggatggacggggccatatatgtcgccact
gctctgtctgagaaccatggtctgcaccatattaatctccagggaaatcccattggggaa
tccgctgccaggatgatctcagaggctatcaagacaaatgctcccacatgcactgtggaa
atgtaa
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