Arvicanthis niloticus (African grass rat): 117711816
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Entry
117711816 CDS
T08817
Symbol
Wdr11
Name
(RefSeq) WD repeat-containing protein 11
KO
K24260
WD repeat-containing protein 11
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117711816 (Wdr11)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117711816 (Wdr11)
Membrane trafficking [BR:
anu04131
]
Endosome - Lysosome transport
Others
Others
117711816 (Wdr11)
Cilium and associated proteins [BR:
anu03037
]
Other cilia and associated proteins
Other cilium assembly proteins
117711816 (Wdr11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
Beta-prop_WDR11_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
EIF3I
Beta-prop_RIG_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_RIG_1st
Beta-prop_HPS5
RAB3GAP2_N
Beta-prop_CAF1B_HIR1
Beta-prop_BBS7
TPR_GEMI5
WDR54
NDNF_N
Motif
Other DBs
NCBI-GeneID:
117711816
NCBI-ProteinID:
XP_034363613
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Position
1:96605077..96651621
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AA seq
1224 aa
AA seq
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MLPYTVNFKVSARTLTGALNAHNKAAVDWGWQGLIAYGCHSLVVVIDSNTAQTLQVLEKH
KADIVKVKWARENYHHNIGSPYCLRLASADINGKIIVWDVAAGVAQCEIQEHVKPIQDVQ
WLWNQDASRDLLLAIHPPNYIVLWNADTGTKLWKKSYADNILSFSFDPFDPSHLTLLTSE
GIVFISDFSPSKPPSGPGKKVYISSPHSSPAHNKLAAATGAKKALNKVKILITQEKPSAE
FVALNDCLQLAYLPSKRNHMLLLYPREILILDLEVNQTVGVIAIERTGVPFLQVIPCSQR
DGLFCLHENGCITLRVRRSYNSICTSSNDEPDLDPVQELTYDLRSQCDAIRVTKTVRPFS
MVCCPVNENAAALVVSDGRVMIWELKSAVCSRNARNSSSGVSPLYSPVSFCGIPGGVLQN
KLPDLSLDNMIGQSAIAGEEHPKGSILQEVHLKFLLTGLLSGLPSPQFAIRMCPPLTTKN
IKMYQPLLAVGTSNGSVLVYHLTSGLLHKELSVHSCEVKGIEWTSLTSFLSFAASTPNNM
GLVRNELQLVDLPTGRSTAFRGDRGNDESPIEMIKVSHLKQYLAVVFKDKPLELWDIRTC
TLLREMSKSFPAITALEWSPSHNLKSLRKKQLATREAMARQTVVSDAELGAVESSVISLL
QEAESKSELSQNISAREHFVFTDNDGQVYHLTVEGNSVKDSARIPPDGSMGSITCIAWKG
DTLVLGDMDGNLNFWDLKGRVSRGIPTHRSWVRKIRFAPGKGNQKLIAMYNDGAEVWDTK
EVQMVSSLRSGRNVTFRILDVDWCTSDKVILASDDGCIRVLEMSMKSTCFRMDEQELIEP
VWCPYLLVPRAALALKAFLLHQPWNGRYSLDISHIDYPENEEIKTLLQEQLHALSNDIKK
LLLDPEFTLLQRCLLVSRLYGDESELHFWTVAAHYLHSLSQAKAGDTVVTKEGAPKDRLN
NPLDICYDVLCENAYFQKFQLERVNLQEVKRSTYDHTRKCTDQLLLLGQTDRAVQLLLET
SADNQHYYCDSLKACLVTTVTSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKAADAC
RYLQTYGEWNRAAWLAKVRLNSEECADVLKRWVDHLCSPQVNQKSKALLVLLSLGCFVSV
AETLHSMRYFDRAALFVEACLKYGAFEVSEDTEKLITAIYADYARSLKSLGFKQGAVHFA
SKAGAAGRDLLNELGSPKEELTEG
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttaccctacaccgtgaacttcaaggtgtcggcgcgcaccctcaccggggctctcaac
gcacacaacaaggcggcggtggactggggctggcaaggtttaattgcatatggatgtcat
tcgcttgtggtagtgatcgattccaatactgcccaaactctacaagttctagaaaaacat
aaagctgatattgttaaggtcaagtgggccagggagaactatcaccacaacattggctct
ccgtattgcctgcgcttggcttctgctgacatcaatgggaagatcattgtttgggatgta
gcagcaggagtagctcagtgtgagatccaagagcatgtcaagcctatccaagatgtgcag
tggctgtggaatcaggatgcttcccgggacttactgcttgctatccatccaccaaattac
attgtgctctggaatgcagacactggcaccaaactgtggaagaagagctatgcagataac
atcctttctttttcttttgacccatttgatccttcacatttaactttactcaccagcgag
ggcatcgttttcatctcagacttctctccatccaagcctccctctggccctgggaaaaaa
gtgtacatctctagcccacactctagcccagctcataacaagctggctgcagccaccgga
gccaagaaggctcttaataaagtaaagattttgatcactcaggagaaacctagtgctgaa
tttgtagctctcaatgactgcctccagttagcctatctgccttcaaaaaggaatcacatg
ctgttgctctaccctcgggagattttaatccttgaccttgaagtgaatcaaacagttggc
gtgattgcaatcgagagaacaggcgttccctttctgcaggtaataccgtgctctcagcgc
gatggcctgttttgcctacatgaaaatggctgcataaccttacgtgtccggaggtcttat
aacagtatctgtacttcttcaaatgacgaaccagatctagatcctgttcaggagcttacc
tatgacttgagaagccagtgtgacgcaatcagggtgacgaaaactgtccgtcccttcagt
atggtgtgctgtcctgttaatgagaatgcagctgccctcgtagtaagcgacggcagagtc
atgatatgggaactcaagtctgctgtgtgcagtcgaaatgcacggaacagtagttccggt
gtgtcacctttatactcgccagtgtctttctgtgggattcctggaggagtgctacagaat
aaactccccgacctttccctagataatatgatcggacaaagtgcgattgctggggaagag
catcccaaaggctccattctgcaggaagtgcacctcaaattcctgctgacaggactgctc
tcaggactcccttcccctcagtttgccatccggatgtgcccaccactgaccacaaaaaac
attaagatgtatcagccactccttgctgttggtacaagtaacggttctgtcctggtgtac
cacctcaccagtggtctgctgcacaaggagttaagtgtccactcgtgtgaagtcaagggt
attgaatggacaagcttgaccagtttcctttcttttgctgcttcaaccccaaacaacatg
gggttagtaagaaatgaacttcagctggttgatctcccaacagggaggagcactgctttt
cgtggtgaccggggcaatgatgaatcacccattgaaatgatcaaagtgtctcatttgaaa
cagtatttggcagttgttttcaaagataagcccctggaattatgggatattagaacttgc
actcttcttagagaaatgtctaaaagcttccctgcgataactgcactggagtggtcacca
tctcacaacctgaagagcctgagaaagaagcagcttgccacccgggaggccatggcccgc
cagactgtagtctcagatgcggagctgggtgctgttgaatcatctgtgatcagtttatta
caggaggcagaaagtaagtctgaactcagtcagaacatctctgctcgggagcattttgtg
tttactgacaatgatggccaagtttatcatctcactgttgaaggaaattctgtgaaagac
agtgctcggattccaccagatggtagcatgggcagtattacctgcatcgcttggaaaggg
gatacattagtgcttggagatatggatggaaatttaaacttctgggatttgaaaggcaga
gtatccagaggaatacccacacatagaagttgggtgaggaagattcgttttgcccctggc
aagggaaaccagaagctaatagcaatgtataatgatggcgctgaagtttgggatactaaa
gaggttcagatggtgagcagtttaagaagtggaagaaatgtgacctttcggattttggat
gtggactggtgcacatcagataaggtgatcttggcatctgatgacgggtgcatcagagtt
ctggagatgtcaatgaagtctacgtgtttcagaatggatgagcaggagttaatagagcct
gtgtggtgcccatacctccttgttccaagggccgcccttgccttgaaagccttcctacta
caccagccttggaatgggcgatattctttggacatttctcacattgattacccagaaaat
gaagaaataaagactctccttcaagaacagttgcatgcactgtctaacgacataaagaaa
ctcctgcttgatcctgaattcactctcttgcagaggtgcctgctggtttccaggctttat
ggcgacgagtcagagctgcacttttggacagtggctgcccactacctgcacagcttgtcc
caagccaaggctggggacacagtggtaaccaaggaaggtgctcctaaggacaggctgaac
aacccactggatatctgctatgatgtgctctgtgaaaatgcctacttccagaaatttcag
ctagaaagagttaatctacaggaagtaaaacggtcaacttatgatcacacaaggaaatgc
acagaccagctcctgctgttgggacagacagacagagctgtacagctgctgttggaaaca
agtgcagataaccagcactactactgtgactcgctgaaagcttgcttggtcaccactgtc
acctcttcaggcccttctcagagcacaattaagctggtagcaaccaatatgatcgccaat
ggcaagctggcagagggcgttcagttactctgtctgatagacaaggctgcagacgcctgt
cgctacctgcagacatatggcgagtggaatcgggcggcatggcttgcaaaggttcggtta
aattctgaagaatgtgcagatgttctgaagcggtgggttgaccacctttgttctccacaa
gtcaaccagaagtccaaggccctcttggtcctcctctctctgggttgctttgtcagcgtg
gcagagacgcttcacagcatgagatactttgatagagctgcgttgtttgtggaagcctgt
ctcaagtatggtgcatttgaagtcagtgaggacacagagaagctcatcactgccatctat
gcagactatgcccgaagcctgaagagcctcggctttaaacagggagcagtgcattttgct
tcaaaagctggagcggctggcagagatttattgaatgagctggggtcccccaaggaggaa
ctaacagaaggctga
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