Arvicanthis niloticus (African grass rat): 117711923
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Entry
117711923 CDS
T08817
Name
(RefSeq) keratin, type I cytoskeletal 42
KO
K07604
type I keratin, acidic
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04382
Cornified envelope formation
anu04915
Estrogen signaling pathway
anu05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
117711923
09158 Development and regeneration
04382 Cornified envelope formation
117711923
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
117711923
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117711923
04147 Exosome [BR:
anu04147
]
117711923
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117711923
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117711923
Exosomal proteins of other body fluids (saliva and urine)
117711923
Exosomal proteins of colorectal cancer cells
117711923
Exosomal proteins of melanoma cells
117711923
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Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
Bacillus_HBL
DUF1664
CCDC39
Motif
Other DBs
NCBI-GeneID:
117711923
NCBI-ProteinID:
XP_034363760
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Position
6:22125235..22132582
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AA seq
452 aa
AA seq
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MASTTSIRQFSTSSSVKGLCAPGMGFSRMSSVRVGGACRAPSLLGGGSCGNMSVTSSRFS
AGLGGGYGSGYACSLGGGFGSSFGVSDALLGGSEKETMQNLNDRLATYLDRVRALEEANT
DLEVKIREWYKKQGPGPARDYSPYFKTIEDLRNKILAATIDNASIVLQIDNARLAADDFR
TKYETELNLRMSVEADINGLRRVLDELTLSRADLEMQIESLKEELAYLKKNHEEEMNALR
GQVGGDVNVEMDAAPGVDLSRILNEMRDQYEKMAEKNRKDAEEWFFTKTEELNREVATNT
EALQSSRTEITELRRSVQNLEIELQSQLSMKASLENSLAETEARYGAQLAQLQGLISSVE
QQLCELRCDMERQNHEYQVLLDVKTRLEQEIATYRRLLEGEDAHLATQYSSSLASQPSRE
GTVTSRQVRTIVEEVQDGKVVSSREQVHRSTH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcttctactaccagcatccgccagttttcaacctccagctctgttaagggcctttgc
gctcctggcatggggttctcccggatgtcctctgtccgtgttgggggtgcctgccgggct
cccagcctcttgggaggtggaagttgtggcaatatgtcggtcacatcctcccgattctcc
gcaggcttaggaggcggctatggtagtggctacgcttgcagcctgggcgggggctttggc
tccagtttcggtgtgtcggatgccctcctagggggcagtgagaaggagaccatgcagaac
ctcaatgaccggctggccacctacttagacagggtgcgtgccctggaggaggccaacact
gacctggaggtgaagatccgtgagtggtacaagaagcagggccctggacctgctcgtgac
tacagcccctacttcaagaccatagaggacctgaggaacaagatcctggcagccacaatt
gacaatgccagcatcgtgctacagattgacaatgctcgcctggcagccgatgacttccgc
accaagtacgagacagagttgaacctgcgtatgagcgtggaggctgacatcaatggcctg
cgccgggtgctggatgagctgaccctgtccagagctgacctggagatgcagattgagagc
ctcaaggaggagctggcctacctgaaaaagaaccatgaggaggaaatgaatgcccttcgt
ggccaggtgggcggggatgtcaacgtggagatggacgcagcccccggagtggacctgagc
cgtatcctgaatgagatgcgagaccagtacgagaagatggcagagaagaaccgcaaggat
gcggaagaatggttcttcactaagacagaggagctgaaccgagaagtggccaccaacacg
gaggccctgcagagcagccggacggagatcacagagctccgtcgctctgtgcagaacctg
gagatcgagctgcagtcccagctcagcatgaaagcatccctggagaacagcctggcagag
acagaggcgcgctatggggcacagctggcgcagcttcagggcctcattagcagcgtggaa
cagcagctgtgtgagctgcggtgtgacatggaaaggcagaatcatgagtaccaggtgctg
ctggatgtaaagaccaggctggagcaggagatcgccacttaccgccgcctgctggaggga
gaggatgcccacctggctactcagtactcctcatccctggcttcgcagccctcccgagaa
ggcacggtgaccagccgccaggttcgcaccattgtggaagaagtccaggatggcaaggtg
gtctcttccagagagcaggtgcaccgttccacccactga
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