Arvicanthis niloticus (African grass rat): 117712009
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Entry
117712009 CDS
T08817
Symbol
Ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu01522
Endocrine resistance
anu04350
TGF-beta signaling pathway
anu04919
Thyroid hormone signaling pathway
anu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117712009 (Ncor1)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
117712009 (Ncor1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
117712009 (Ncor1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
117712009 (Ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117712009 (Ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117712009 (Ncor1)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117712009 (Ncor1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
117712009 (Ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
117712009
NCBI-ProteinID:
XP_034363882
LinkDB
All DBs
Position
6:59142774..59290514
Genome browser
AA seq
2552 aa
AA seq
DB search
MSSSGYPPNQGTFSTEQSRYPSHSVQYTFPSTRHQQEFAVPDYRSSHIEVSQASQLLQQQ
QQQQQQQQQQQQQLRRRPSLLSEFHPGSDRPQERRSGYEQFHSGPSPVDHDSLESKRPRL
EPVSDAHFQRVSAAVLPLVHTLPEGLRSSADAKKDSAFGGKHEAPSSPLAGQPCGDDQNA
SPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQK
HRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLIL
FFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRK
QREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAE
QRRVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSV
PDCVLYYYLTKKNENYKALVRRNYGKRRGRNQQIARPSQEEKVEEKEEDKAEKTEKKEEE
KKDDEEKDEKEDSKEITKEKDRTEATAEETEEREQVTPRGRKTANSQGRRKGRITRSMTS
EAAAASAAAAATEEPPQPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAK
MVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKVSRAVVASRKPREERDVSQCESVASTV
SAQEDEDIEASNEEENPEDSEGAENSSDTESAPSPSPVEAAKSSEDSSENAASRGNTEPV
AELEATTDPAPCASPSSAAPTTKPAESESAEAQVTDSASVETAEPMDVDREQCGAEGSSG
LDPPAPAKADSVDPEMQVPENTASKGEGDATERDLESTNEKTEARDEDLVVAEQIQRPEP
QSDNDSSATCSADEDVDGEPERQRVFPMDAKPSLLNPPGSVLLSSPIKPNPLDLPQLQHR
AAVIPPMVSCTPCNIPIGTPVSGYALYQRHIKAMHESALLEEQRQRQEQIDLECRSSTSP
CGTSKSPNREWEGKSVAYMPYAEVKRALEQEAQMHSTAARSASPCRLSPREVSKAASQPD
MSAARYSVPPVLQPAPHQVITNLPEGVRLPTTRPTRPPPPLIPSSKTTVASEKPSFIMGG
SISQGTPGTYLSSHNQAYTQEAAKPSVGSISLGLPRQQESTKSAPLTYIKQEEFSPRSQN
SQPEGLLVRAQHEGVVRGTAGAVQEGSITRGTPASKISVESISSLRGSITQGTPALPQAG
IPTEALVKGPVSRMPIEESSPEKVREEAASKGHVIYEGKSGHILSYDNIKNAREGTRSPR
TAHEMSLKRSYESVEGNIKQGMSMRESPVSAPLEGLICRALPRGSPHSDLKERTVLSGSI
MQGTPRATAESFEDGLKYPKQIKRESPPIRAFEGAITKGKPYDGITTIKEMGRSIHEIPR
QDILTQESRKTPEVVQNTRPIIEGSISQGTPIKFDNNSGQSAIKHNVKSLITGPSKLPRG
MLEIVPENIKVVERGKYEDVKAGEPVRPRHTSVVSSGPSVLRSTIHEAPKAQLSPGIYDD
SSARRTPVSYQNTISRGSPMMNRTSDVSSSKSTSHERKSTLTPTQRESIPAKSPVPGVDP
VVSHSPFDPHHRSSAAGEVYRSHLPTHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQ
YQLYAMENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQPLGLPYPATRGIIDLTNMPP
TILVPHAGGTSTPPMDRITYIPGTQITFPPRPYNAASLSPDLCFTGHPTHLAAAASAERE
REREREKERERERERERERERDRERERERERERERERERERERITAAPADLYLRPGSDPP
GRPGSHGYVRSPSPSVRTQETMLQQRPSVFQGTNGTSVITPLDPAAQLRIMPLPSGGPSI
SQGLPASRYNTAADALAALVDAAASAPQMDVSKTKESKHEAARLEENLRSRSAAVSEQQQ
LEQKNLEVEKRSVQCVCTSSALPSGKPQPHASVVYSEAGKDKGPPPKSRYEEELRTRGKT
TITAANFIDVIITRQIASDKDARERGSQSSDSSSSLSSHRYEAPSDAIEVISPASSPAPP
QEKPQAYQPEMVKANQAENESTRQYEGPLHHYRSQQESPSPQQQPPMPPSSQPEGMGQVP
RTHRLITLADHICQIITQDFARNQVPSQPSTSTFQTSPSALSSTPGRTKTSSRYSPESQS
QTVLHPRPGPRVSPENLVDKSRGSRPGKSPERSHIPSESYEPISPPQGPAVHEKQDSVLL
LSQRGVDPAEQRSDSRSPGSISYLPSFFTKLESTSPMVKSKKQEIFRKLNSSGGGDSDMA
AAQPGTEIFNLPAVTTSGAVSSRSHSFADPASNLGLEDIIRKALMGSFDDKVEDHGVVMP
HPVGVVPGSVSTSVVTSSETRRDEGDPSPHSAVCKPKLINKSNSRKSKSPIPGQSYLGTE
RPSSVSSVHSEGDYHRQTPGWAWEDRPSSTGSTQFPYNPLTIRMLSSTPPTPIACVPSAI
TQAAPHQQNRIWEREPAPLLSAQYETLSDSDD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggttaccctcccaaccaaggaactttcagcacagagcaaagtcgttat
ccttcacattctgtccagtatacctttcccagtactcgacaccagcaggaatttgcagtt
cctgactatcgttcttctcacatcgaagtcagccaggcatcgcagcttttacaacagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcttcgaagacgaccgtccttg
ctttcagaatttcacccaggttctgacaggcctcaagaaagaagaagtggatatgaacag
tttcactcaggtccttccccggtggatcatgattccttggagtccaagcggccacgcctc
gagcccgtttctgatgcccatttccagcgtgttagtgctgcggttttacctttagttcac
acgctgccagaagggctgaggtcgtctgcagatgctaagaaggattcagcatttggaggc
aaacatgaagctccatcctctccattggctgggcaaccatgtggagatgatcaaaacgct
tcaccttcaaagctttcgaaggaagagttaatacagagtatggatcgggttgaccgagag
attgcaaaagtagagcagcagatccttaaattgaaaaagaaacaacaacagctagaagaa
gaagcagctaagccccctgagccggaaaagcctgtgtcccctcctcctgtggaacagaaa
catcgtagtattgtccaaattatttacgatgagaatcggaaaaaagcagaagaagctcat
aaaatatttgaaggacttggcccaaaagttgaactgccactttataaccagccatcagat
accaaggtgtaccatgagaacatcaagacaaaccaggtgatgaggaaaaaactcatttta
ttttttaaaagaagaaatcatgcaagaaaacaaagggaacaaaaaatctgccagcgttat
gatcagctcatggaagcatgggagaaaaaagtggacagaatagaaaataatccccggagg
aaagcaaaagaaagcaaaacaagggaatactatgagaagcagtttccagaaattcgaaaa
caaagagaacagcaagaaagatttcagcgagttggtcagaggggagctggtctttcagcc
accattgctaggagcgagcatgagatttctgaaattattgatggtctttctgagcaggag
aataatgagaagcaaatgcgtcagctttctgtcattccacctatgatgtttgatgcagaa
caaagaagggtcaaattcatcaatatgaatggacttatggaggatccaatgaaggtttat
aaagacagacagtttatgaatgtttggactgaccatgaaaaggagatctttaaggacaag
tttatccagcatccaaaaaactttggactaattgcatcctatttggaaaggaagagtgtc
cctgattgtgttttatattactatttaaccaagaaaaatgagaattataaagcccttgtg
agaaggaattatggaaaacgcagaggcagaaatcagcagattgcccgtccctcacaagaa
gaaaaagtagaagaaaaagaagaggataaagcagaaaaaacagagaaaaaggaagaagaa
aagaaggatgatgaagaaaaagatgagaaggaagactctaaagaaataaccaaggaaaag
gacagaacagaagccacagcagaagaaactgaggagagagaacaggtcactccgaggggg
cgaaagactgctaacagccaggggcgccggaagggccggatcaccaggtccatgacaagt
gaagctgcagctgccagtgctgctgctgcagccactgaggagccccctcaacccctgcca
ccaccaccagagcccatttctactgaacctgttgagacttcaagatggacagaagaagaa
atggaagttgctaaaaaaggcctggtagaacatggtcgtaactgggcagccattgccaaa
atggtgggaactaaaagtgaagcccagtgtaaaaacttctattttaactataaaagacgg
cacaatcttgacaaccttttacagcaacataaacagaaagtgagtagagcagtggtggct
tcacgaaaaccccgtgaggaacgagatgtgtctcagtgtgaaagtgttgcttccactgtt
tctgctcaagaggatgaagatattgaagcctcaaatgaggaggagaatccagaagatagt
gaaggtgctgaaaatagttctgatacagaaagtgctccctctccttcaccagttgaagct
gccaagtccagtgaagacagcagtgaaaatgctgcttctcgaggaaacaccgaacctgtg
gctgagcttgaggccaccactgaccctgcaccctgtgcatctccctcttcagcagctcca
accacaaaaccagcagaaagtgaaagcgcggaggcccaggtgactgacagcgccagtgtg
gagaccgcagagccgatggatgtagaccgtgagcagtgcggtgccgagggcagttctggt
cttgatccaccagcccctgccaaagccgactccgtggacccagaaatgcaggtacctgaa
aatactgcgtctaaaggtgaaggggatgccacggagagagacttggagagcaccaatgag
aagacagaggctagagatgaagacttggtagtggctgagcagatccagaggcctgaacca
cagtcagacaacgactcgagtgccacatgcagtgcagatgaggatgttgatggggagcca
gagaggcagagagtgtttcccatggatgcaaagccttcattgttaaaccctcctggatct
gtactactctcatcccctattaaaccaaacccattggatctgccacagcttcagcatcgt
gctgctgttatccctccaatggtttcttgcaccccatgtaatataccaattggaacgccc
gtaagtggctatgctctttaccaacggcacattaaggccatgcacgagtcagcactcctg
gaggaacagcggcagaggcaagaacagatagacctggaatgcagaagctctacaagccca
tgtggcacttctaagagtccaaacagggagtgggaaggaaaatcagtcgcctatatgcct
tatgctgaggtcaaacgtgctctagaacaggaagcacagatgcacagtaccgcagcaagg
tcagcctcaccgtgtaggctctctccaagagaagtcagtaaagccgcttcacagcctgat
atgagtgcagcccgctatagtgtccctccagtcctccaacctgctccacatcaagtgata
actaaccttcctgaaggggttcggctaccaacaacgagaccaaccaggccaccacctccc
ctcatcccatcatctaaaaccacagtggcatcagaaaaaccatcctttataatgggaggg
tccatctcacagggaactcctggcacttacttgtcttctcataatcaggcttacactcaa
gaagcagctaagccctcagtggggtctatctctcttggattgccacggcagcaagaatct
actaaatcagctcctttgacctacatcaaacaggaagaattttctccacgaagccaaaac
tcacaacctgagggtttattggtcagagcacagcatgaaggtgtggtcagaggcactgca
ggggctgtccaagaaggaagtataactcggggaactccagccagcaaaatctcagtggag
agcatttcatccttgcggggctctattacacagggcaccccagctctgccccaggctggc
ataccaacagaggctttggtgaagggacctgtttcaaggatgcctattgaagaaagcagt
cctgagaaggtcagagaggaagctgcatccaaaggccatgttatctatgaaggcaaaagt
ggccatatcttatcatatgataatattaagaatgcccgagaagggactcggagtccaaga
acagctcatgaaatgagtttaaaaagaagctatgagtcagtggaaggaaatataaagcaa
ggcatgtcgatgagggagtctcctgtatcagcacctttagagggtctgatatgccgagca
ttacccagggggagccctcattctgacctcaaagaaaggactgtgctgtctggttccata
atgcagggcacaccaagagcaacagctgaaagttttgaagatggccttaaataccccaaa
cagataaaaagggaaagccctcctatccgagcatttgaaggtgccattaccaaaggaaaa
ccatatgatggtatcacaaccatcaaagaaatgggacgttccattcatgaaattccacga
caagatattctaactcaggaaagccgaaaaactccagaagtggtccagaacacgaggcca
ataattgagggttctatttcccagggcacaccaataaaatttgacaacaactcaggtcaa
tcagctatcaaacacaatgtgaagtccttaatcacagggcctagcaaactaccccgtgga
atgctggaaattgtaccagagaacataaaagtagtagaacggggaaaatatgaggatgtg
aaagcaggcgagccagtgcgaccccggcacacgtcagtggtgagctctggcccctccgtt
ctcaggtctacaattcatgaagctcccaaagcccagctgagcccgggaatctatgatgac
agcagtgctcgcaggactcctgtgagctaccagaacaccatctccagaggctcccccatg
atgaacagaacttctgatgtttcttccagcaagtctaccagccatgaaaggaaatcaact
ctgaccccaacccaaagggaaagtataccagccaagtctccagtgcctggggtggatccc
gtcgtgagtcacagcccatttgatccccatcataggagtagcgctgcaggagaggtttat
cggagccaccttcccacgcacttggatccagccatgccctttcacagggctttggatcct
gcagctgctgcttacctgtttcagagacagctttcaccaaccccaggatacccaagtcag
taccagctttatgcaatggagaatacaagacagacaatcctaaatgattacattacctca
cagcagatgcaagtgaatctgcgccctgatgtcaccaggggactgtccccacgagagcag
ccactgggtctcccttatccagctacaagaggaatcattgacctgaccaatatgcctcca
acaattttagtgcctcatgcagggggaacaagcactcctcccatggacagaatcacttat
attcctggtactcagattactttccctcccaggccatacaacgctgcttctttgtctcca
gatttatgttttacagggcacccaacacaccttgcagcagctgcaagtgccgagagggag
cgagagcgggaaagggagaaggagcgagagcgggaacgggaacgtgagcgggaacgtgag
cgggaccgtgagcgggaacgggaacgtgaacgggaacgtgagcgcgagcgcgagcgcgag
cgcgaaaggatcactgctgctcccgctgacctctacctacgaccaggttcagatccgcca
ggccgccctggcagccatggatatgttcgctccccttccccttcagtaagaactcaggag
accatgttgcaacagagacccagtgttttccagggaaccaatggaactagtgtaatcaca
cctttggatcctgctgctcagctacgaatcatgccactgccttctgggggcccttcgata
agtcaaggcctgccagcctcccgttacaacactgctgcggatgccctggctgctcttgtg
gatgctgcagcttctgcaccccagatggatgtttccaaaacaaaagagagtaagcatgaa
gctgccaggttagaagaaaatttgagaagcaggtcagcagcagttagtgaacagcagcag
ctagagcagaaaaacctggaggtggagaagagatctgttcagtgtgtgtgcacttcttca
gcccttccaagtggcaagccccagcctcatgcctcagtagtgtattctgaggctgggaaa
gataaagggcctcctccaaaatccagatatgaggaagagctaaggacgcgagggaagact
accattactgcagctaacttcatagacgtgatcatcacccggcagattgcctcggacaag
gatgcgagggaacgtggctctcaaagttcagactcttctagtagcttgtcttctcacagg
tatgaagcacctagtgatgctattgaggtgataagccctgccagctcacctgcaccaccc
caggaaaaaccacaggcctatcagccagagatggttaaggcaaaccaagcagaaaatgag
tccactcgacagtatgaaggaccactgcatcattatcggtcccagcaggaatcgccatct
ccacagcaacagccaccaatgcccccatcttcccagccagagggaatgggacaggttccc
aggacccatcgactgatcacacttgcagaccacatctgtcaaattatcacacaagacttt
gctagaaatcaagttccctcacagccttctacttctacattccaaacgtcaccatctgct
ttgtcgtccacacctggaagaactaaaacatcaagtcgctacagcccagaatcacagtct
cagactgtcttgcatcccagaccaggtcctagagtctctccagaaaaccttgtggataaa
tcccggggaagcaggcctggaaaatctccagagaggagtcacatcccatcagagtcctat
gagcccatctccccaccccagggtcctgctgtgcatgagaagcaggacagtgtgctgctc
ttgtcacaaaggggagtggaccctgctgagcaaaggagtgattctcgatcaccaggaagt
ataagctacttgccttcattcttcaccaagcttgaaagcacatcgcccatggttaaatca
aagaagcaggaaatttttcgtaagttgaactcctctggtggaggtgactctgatatggca
gctgctcagccaggaacagagatcttcaatctgccagcagttactacatcaggtgcagta
agctcaagaagccattcttttgctgatcctgccagtaatctcgggctagaagacatcatc
agaaaggctctcatgggaagtttcgatgataaagttgaagatcatggtgttgtcatgccc
catcctgtgggagttgtgcctggtagtgtcagcacttcagttgtgactagcagtgagaca
agaagagatgaaggggacccatcacctcattcagcagtatgcaaaccaaagctgatcaac
aaatcaaacagcaggaagtctaaatctcctattcctgggcaaagctacttaggaactgaa
agaccctcttctgtctcctctgtacattcagagggtgattaccacaggcagacaccagga
tgggcctgggaagacaggccctcttcaacaggttctactcagttcccgtacaaccctctg
accatacggatgctcagcagcacaccgccaacaccgatcgcatgtgtcccgtctgccatc
acccaagcagctccacatcaacagaaccgcatctgggagcgggaacctgcccctctcctc
tcagcacagtatgagacactgtctgatagtgacgactga
DBGET
integrated database retrieval system
