Arvicanthis niloticus (African grass rat): 117712014
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Entry
117712014 CDS
T08817
Symbol
Hcrt
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04080
Neuroactive ligand-receptor interaction
anu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117712014 (Hcrt)
04081 Hormone signaling
117712014 (Hcrt)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
anu04052
]
117712014 (Hcrt)
Cytokines and neuropeptides [BR:
anu04052
]
Neuropeptides
GPCR binding
117712014 (Hcrt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orexin
Motif
Other DBs
NCBI-GeneID:
117712014
NCBI-ProteinID:
XP_034363897
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All DBs
Position
6:21644818..21646078
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AA seq
130 aa
AA seq
DB search
MNLSSTKVPWATVTLLLLLLLPPALLSLGVDAQPLPDCCRQKTCSCRLYELLHGAGNHAA
GILTLGKRRPGPPGLQGRLQRLLQANGNHAAGILTMGRRAGAELEPHPCPGRRCLTTTAT
ALAPRGGSGV
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttcttctacaaaggttccctgggccaccgtgacgctgctgctgctgctactg
ctgccgccggcgctgctgtcgcttggggtggacgcacagcctctgcccgactgctgtcgc
cagaagacgtgttcctgccgtctttatgaactattgcacggagctggcaaccacgctgcg
ggcatcctgactctaggaaagaggcgacctggacctccaggcctccagggacggctgcaa
cgcctccttcaagccaacggcaaccacgcagctggcatcctgaccatgggccgccgcgca
ggcgcagagctagagccacatccctgccctggtcgccgctgtctgaccacaactgccacc
gctttagcgccccggggcgggtccggagtctga
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