Arvicanthis niloticus (African grass rat): 117712036
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Entry
117712036 CDS
T08817
Symbol
Tubgcp5
Name
(RefSeq) gamma-tubulin complex component 5
KO
K16572
gamma-tubulin complex component 5
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117712036 (Tubgcp5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117712036 (Tubgcp5)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
117712036 (Tubgcp5)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
117712036 (Tubgcp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
GCP5-Mod21_N
DUF7943
DUF5601
Motif
Other DBs
NCBI-GeneID:
117712036
NCBI-ProteinID:
XP_034363929
LinkDB
All DBs
Position
1:27644137..27679617
Genome browser
AA seq
1024 aa
AA seq
DB search
MARPKSSGSRMDRQLERDVCELVRQVTGLRDEADPNFQLALDFVWSNFRFHRFLDVNSHK
VEKTIEGIYEKFTIHSDLSKAASWKRLTEEFLNASLPSTEKIKTDTHYAILSVLLCLADS
PSNSNYVETPREKEVEKKDDFDWGKYLMEGEEIGLGPNIDTPNWSEDSDDEDAQQPLSRE
DSGIQVDRTPLEEQDPNRKGGTQVCWEDEPDSRSWLEQHVVHQYWTTRRSRIPHSSHLHS
NLAAVWDQHLYSSDPLYVPDDRVVVTETQVIRETLWLLSGVKKLFIFQVIDGKVTVRNNI
IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESPSPGNDPIPKKPPDAPFRT
YQAFMWALYKYFINFKEELTEIEKCVISSDTTVTLAIVVNKLSPRLAQLKVLDKVFSTGV
AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI
VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEDKVSDSASASSGSDQG
PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLNCAEGSAYQAAARDAERKSLYTLFLESI
QLRLQHGEDSAPHILNEEQATKENLIKMQSIAERHLELDDIHDPLLAINFARLYLEQSDF
HEKFAGGDICVDRSSESVTCQTFELTLRSCLYPHIDKQYLHCCGNLMQTLKRDFRLVEYL
QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSLRLSIS
FENVDTTKKKLPVHILDGLTLSYKVPWPVDIVISVECQKIYNQVFLLLLQIKWAKYSLDV
LLFGELANAAERSQAKEDILRDQDTPSQFGPPKESLRQQIHRMFLLRVKLMHFVNSLHNY
IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL
ALMFAEGWQAGLGAWQMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLALSLMAG
MEQS
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcctaagtcgtccgggagccggatggacagacagctggaacgcgatgtgtgt
gagctcgtccggcaggttacaggcctgcgggacgaggcggatcccaacttccagctggcc
ttggacttcgtctggtccaacttcagatttcatcgtttcttggatgtcaacagtcacaaa
gtagaaaaaacaatagaaggaatttatgaaaaattcaccattcattctgatctcagcaaa
gctgctagctggaagagattaactgaggagtttctaaatgcatctcttcccagcacagag
aaaataaagacagatactcattatgccatactgtcagtccttctctgtctggctgattct
ccttcaaacagcaattatgtggaaaccccgagagagaaagaagtggaaaagaaggatgat
tttgactgggggaaatacttgatggaaggtgaagaaattggccttggtccaaatattgat
acgccgaattggtctgaagacagtgatgatgaagatgcacagcagcccttaagcagagaa
gactctgggatacaggtagacaggaccccgttagaagaacaagaccccaacagaaaaggg
gggactcaagtctgctgggaagatgagccagatagccgtagctggctggaacagcatgta
gtccatcagtactggacaaccaggcgctcccgaattccacacagttcacatttgcactcc
aatttagctgctgtctgggaccagcacctgtacagcagtgacccactgtatgttccagat
gacagggtggtggttactgagacacaggtcattcgggaaaccctatggttactttcaggg
gtaaaaaagctgtttatattccaggtgattgatggaaaagtaactgtgagaaacaatatt
atcgtaactcatttgacacatagctgtttacgatctgtgctggaacaaatagcagcatat
ggccaggttgtatttcggctccaggaattcattgatgaagtcatggggcacagctctgaa
agtccatcaccaggaaatgaccccatacccaagaaaccacctgacgctccctttagaacc
taccaggccttcatgtgggccctctacaaatacttcattaacttcaaggaggagcttaca
gagattgagaagtgtgtcataagtagtgatacaacagtaacacttgcaatagtggtgaac
aagttgtcacctcgattggcacagctaaaggtcctggacaaagtgtttagtactggagtg
gcggaagttccacctgacactcgcaatgtcgtccgggcatctcacctgcttaacaccctg
tacaaggccattcttgaatatgacaatgttggagaagcctctgaacaaactgtctccctc
ctgttctctctctgggtggaaacagtgaggccctacctccagactgtagatgaatggatc
gtccatggacacctgtgggatggtgcaagggagtttatcatacagaggaataaaaatgtt
ccagtaaatcacagagacttctggtatgcaacgtacacactgtatagtgtatctgagaag
acagagaatgaagacaaagtgagtgacagtgccagcgccagctctggcagtgaccagggg
ccctccagcagacagcacaccatggtgtccttcctcaaacctgtcctgaagcagatcata
atggctggcaagtcgatgcagctgctgaagaacctcaactgtgcagagggctctgcgtat
caggcggcagccagagatgcagaaagaaaaagcttatataccctctttctggaatctata
cagttacgtcttcaacatggagaagattctgctccccacattcttaatgaagagcaagca
accaaagagaacctaataaagatgcagtccattgctgaaaggcatcttgaactagatgat
attcatgacccactgctggccatcaactttgcaaggttatatttggagcagagcgacttt
catgagaagtttgctggcggtgacatatgcgtggatagatcatcagaatctgtgacctgt
cagacgtttgaattaacactgaggtcttgcctctatcctcacattgataaacagtatcta
cattgctgtggaaatctcatgcaaaccttaaagagagatttcaggctagtggagtacttg
caggccatgaggaattttttcttgatggaaggtggagacaccatgtatgacttctatact
tcaatttttgataaaataagagaaaaggaaacctggcagaatgtatcttttcttaatgtc
cagcttcaagaagcagtaggacaacgctatcctgaagatagtttacgtttatctatatct
tttgaaaatgttgatacaactaagaagaaactacccgttcatatcttagatggtcttacc
ctaagctacaaggtcccatggcctgtggacatcgttataagtgtagaatgtcaaaaaatt
tacaatcaggtgttccttctcctattgcaaataaaatgggcaaaatacagcctggatgtt
ctactatttggtgaactagctaatgctgccgaaagatcccaagcaaaggaagacattctg
cgtgaccaagacacgccctcccagtttggaccaccaaaagagtcattaagacagcaaatt
catcgcatgtttctcttaagagtgaagctcatgcactttgtgaatagtttacacaactac
atcatgaccaggattcttcacagtacagggctggagtttcagcatcaagttgaggaagcc
aaagatttagatcagttgattaaaattcactacagatatttgtcaaccatccatgatcga
tgtctgctgagagaaaaggtcagcttcgtgaaagaagccattatgaaagtgctgaacttg
gcgctcatgtttgcagaaggttggcaggcaggcctaggggcttggcaaatggaatctatc
gagaaaatggaatctgactttaaaaactgccacatgtttctagtaaccattttaaataaa
gctgtctgtagaggatcttttccccacttggaatctctggcattgtccctcatggctggc
atggaacaaagttaa
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