Arvicanthis niloticus (African grass rat): 117712076
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Entry
117712076 CDS
T08817
Symbol
Mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04120
Ubiquitin mediated proteolysis
anu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117712076 (Mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117712076 (Mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117712076 (Mgrn1)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117712076 (Mgrn1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117712076 (Mgrn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117712076
NCBI-ProteinID:
XP_034363980
LinkDB
All DBs
Position
6:93814036..93861495
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AA seq
579 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSAGNYFASHFFMGGEKFDTPHPEGYLFGENMD
LNFLGTRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGEKPRVLYS
LEFTFDADARVAITIYCQAVEEFVNGMAVYSCKNPSLQSETVHYKRGVSQQFSLPSFKID
FSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLC
TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPFK
KSKSHPASLASRNTKRETSSDSVPAGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
SDGLSQASCPLAGLDRIIESGLQKGKTQSKSPDSTLRSPSSPIHEEDEEKVSEDSDAPLP
PSGVELVLRESSSPESFGTEEVDEPSLKQGSRVPSIDDVLQDGSPQHHGCSQPVPPADIY
LPGWSTSMETPHSLGTTSSPWPLLSGSSPEPGAAELTPL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagtcgccgcatcgcgggcgtggaggacatcgacattcaggccaac
tcggcctatcgctaccctccgaagtccgcaggaaactactttgcttcgcactttttcatg
ggaggagagaaatttgacactccccatcctgaaggttacctctttggagagaacatggac
ctgaactttctgggcactcgtccagtccagtttccctatgtcacccctgctccccatgag
ccagtgaagacactgaggagcctggtaaacattcgcaaagactctctccggcttgtgagg
tacaaagatgatgcagacagccccactgaggatggtgagaaaccccgtgtgctctacagt
ctggaattcacctttgatgccgatgcccgtgtggctatcacaatttattgccaggcggtg
gaggagttcgtgaatggcatggcagtgtatagctgtaagaacccttctctgcagtctgag
accgtccactacaagagaggcgttagccagcagttctccctgccttctttcaagattgac
ttctccgagtggaaggatgatgagctgaactttgatctggaccggggtgtgtttccagtc
gtcattcaggctgtggtggatgaaggagacgttgtggaagtgactggccacgctcatgtg
ctcttggctgcctttgagaagcatgtggatggcagcttctccgtgaagccattaaagcag
aagcaaattgtggaccgggtcagctacctgctgcaggagatctacggcatcgagaacaag
aacaaccaggagactaagccttctgatgatgagaacagtgacaacagcagcgagtgtgtg
gtgtgcctgtcagatcttcgggacacgctgatcctgccctgtcgccacctgtgcctctgc
acttcctgtgctgacacgctgcggtaccaggccaacaactgccccatctgccggctgcca
ttccgagctctcctgcagatccgggctgtgcggaagaagccaggggccctgtctcccatc
tccttcagccctgtcttggcccaaagtgtggaccatgatgagcactcttgtccctttaaa
aaatcaaagtcgcaccctgcctccctggccagcaggaacactaaaagggaaacaagttct
gacagtgtcccagctggctacgagcccatctccttgctcgaggcactcaatggtctacgg
gctgtctccccggctatcccatcagctcccctgtatgaggaaatcacctactcaggcatc
tcagacggtctttcccaggccagttgtccccttgctggacttgatcgaatcatagaaagt
ggcctacagaagggcaagacacagagcaagtctccagacagcaccctgcggtcgccatca
tcccccatccatgaggaggatgaggagaaggtctcggaggactcggatgctcctctccca
ccaagtggtgtggagctggtgctgcgggagagcagctcccctgagagttttggaacagag
gaggtggatgagccatccctaaagcaagggagccgtgtaccctctattgatgatgtcctg
caggatggcagtccccagcatcacggttgcagccagccagtccctcctgctgacatctac
ctaccaggatggtccacctccatggagacgccacacagccttggcaccaccagctccccc
tggcctctgctgagtggctctagtcctgagcctggagctgctgagctgaccccactctga
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