Arvicanthis niloticus (African grass rat): 117712084
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Entry
117712084 CDS
T08817
Symbol
Usp43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117712084 (Usp43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117712084 (Usp43)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117712084 (Usp43)
Peptidases and inhibitors [BR:
anu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117712084 (Usp43)
Ubiquitin system [BR:
anu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117712084 (Usp43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117712084
NCBI-ProteinID:
XP_034363995
LinkDB
All DBs
Position
6:53892478..53952919
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AA seq
1138 aa
AA seq
DB search
MDPGAGDALGEGPPAPRPRRRRSLRRLLNRFLLALGSRSRSGDSPPRPPAQPSPYDGDGE
GGFACAPGPAPAVAGSPGPDRPPGSQPQISSGDGARPPGAQGLKNHGNTCFMNAVVQCLS
NTDLLAEFLALGRYRAAPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQG
NSQHDALEFLLWLLDRVHEDLEGSAHGLGSEQLPPEVSKISEDLRPSAAPPSLGPSFVQS
HFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAV
PILSTVAALRKMVAEEGGVPAEEVILVELYPNGFQRSFFDEEDLNTIAEGDNVYAFQVPP
SPGPGTLSAHPSGLSVSPRLAVRDSQRFSMPLHSENRVVILFCNLVGSGQQASRFGPPFL
IREDRTISWAQLQQCILSKVRCLMRSEVSAQDLGTLFSIRVVGLSLACSYLSPQDSRPLC
HWAVDRALHLRRPGGPPHVKLAVEWTSSVTERLFGSLQEERVQDADSVWRQQQAHQQPSC
TLDECFQSYTKEEQLAQDDAWKCPHCQVLQQGVVKLSLWTLPDILIIHLKRFCQVGERRN
KLSTLVKFPLSGLNMAPHVARRSTNSKAGPGPWPSWKQPICLPTTYPLDFLYDLYAVCNH
HGSLQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRNSIPPWSASS
SMRGSTSSSLSDHWLMRLGSLNNSTRGSLLSWSSAPCPSVARVPDSPVFTNGVCHQDKGG
VEAKPLVRGVGGRSISMKSPPASRSRHGPFKTMPLRWSFGHREKRPGASVELVEYLESRR
RPRSTSQSIVPLLTRAAAAGDETSASPRSDVTLSAKSEDSSQAIGQRTTGVPLSSCHLNH
QQALGSLDDGLHTARTRTGNASQDIRLPKKFDLPLAVMPSVEDEKPAHPEGQKMTTWKGS
SQVGSQSSPPSPSTGLLRNFKDNGPGTLPKMKAKAALEERAPDKDRGQGTFTLLKSVFWK
KEHKRTVRTESSPPAPPISLVSGRLSPAINVHARGSSPALRIRESPARGLGNHTERDIRS
APSSLHLPRKASRPPRTSTAGTSQRTIPGEQTSYGTLQRVKYHTLSLSRKKSLPESSF
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcgcgggggacgcactgggagaggggccgcccgcgccccggccccgccgc
cgccgttccctgcgccgcctgcttaaccgcttcctgctagctctgggcagccgctcccgc
tcgggggactcgcctccccggcccccggcccagcccagtccctacgatggcgatggagaa
gggggctttgcctgtgccccgggcccggcaccagccgttgcggggagcccagggccagat
cgtcctccgggatctcaaccccagatatcttcaggtgacggggcgcgtccgcccggcgct
cagggtttgaagaaccatggcaacacctgtttcatgaacgcggtggtgcagtgtctcagc
aacaccgacctgctggccgagttcctagcgctggggcgctaccgggcggcgcccggccgc
gccgaggtcaccgagcagctggcggcgctggtgcgcgcgctctggacgcgcgaatacacg
ccccaactttccgcagagttcaagaatgctgtttctaagtatggctcccagttccaaggc
aattcccaacacgatgccctggaattcctgctctggcttctggatcgtgtccatgaggac
ttggagggctcagctcatgggctgggatctgagcagctgcccccagaagtgagtaagata
tcagaggacctccggccatctgcagcgcctccctccttaggccccagttttgtgcagagc
cactttcaagcacagtacaggtcttccttgacttgtcctcactgcctgaaacaaagtaac
accttcgaccccttcctgtgtgtgtcccttcccatccccttgcgccagacgagattcttg
agtgtcactttggtgttcccctctaagagccagcggttcctgcgtgttggcctggctgtg
ccgatcctcagcaccgtggcagccttgaggaagatggttgcagaggaaggaggcgtccct
gcagaggaggtgatcttggttgaactgtatcccaatggattccagcggtcattctttgat
gaagaggacctgaataccattgcagagggtgacaatgtgtatgctttccaagtccctccc
tcacctggtccggggacactctcagctcatccgtctggtctgtcagtgtcaccgcgcttg
gcagttcgtgacagccagcgattctctatgcctctccacagtgagaacagggtggtcatc
ctcttctgtaacctagtgggatcagggcagcaggcgagcaggtttgggccaccgttcttg
atacgggaagatagaacaatctcctgggcccagcttcaacaatgtattctcagcaaggtt
cgatgcctcatgaggagtgaggtctctgcacaggacctggggactctgttttccatccgg
gttgtaggactctccttggcctgcagctacttatctccacaggacagccggcccctttgt
cactgggcagtcgacagggctttgcacctcaggaggccaggaggtcctcctcatgtcaag
ctggctgtggaatggactagctctgtcacagagcgcctgttcgggagcctccaggaggaa
cgggtccaggatgcagacagtgtgtggcggcagcagcaggcacaccagcagcccagctgt
accctggacgaatgttttcagtcctataccaaggaggagcagctggcccaggatgatgca
tggaagtgccctcattgccaagtcctccagcagggtgtggtaaagctgagtttatggact
ctgcctgacatcctgatcatccatcttaaacggttctgtcaggtgggagagagaaggaac
aagctctccacgctggtgaagttcccactgtctggactcaacatggctccccatgtagca
aggaggagcaccaactccaaggcagggcctggcccttggccctcctggaagcagccaatc
tgcctcccgaccacctacccgctggacttcctctacgacttgtatgctgtctgcaaccac
catggcagtctgcaaggtgggcattacacagcctattgccggaactccctggatggccag
tggtacagctatgatgacagcacagtggagcccttgcgagaggatgaggtcaacaccaga
ggggcttacatcctgttctatcagaagcggaacagcattcctccctggtcagcaagcagc
tccatgagaggctccaccagctcctccttgtctgatcattggctcatgagactcgggagc
ctcaacaacagcacaaggggaagcttgctatcctggagctctgccccctgcccctccgtg
gcccgggtacctgactctcctgtcttcaccaatggtgtctgccaccaggacaaaggagga
gttgaggccaagcctttggttcggggtgttggtggccgaagtatcagcatgaagtcacct
cctgcttccagatccaggcatgggcccttcaagaccatgcccctgaggtggtcctttgga
caccgggagaaacgtcctggtgcatctgttgaactggtggaatacctagagtccagaaga
agaccccgctccaccagccagtccattgtgccactcttgacacgtgctgctgctgcaggg
gatgagacatcagcttcaccaaggtcagatgtcaccctttctgctaaaagtgaagacagc
agtcaagccattgggcaaagaacaactggggtgcccctttcctcatgtcacctcaaccac
cagcaagccctggggtccttagatgacggtctgcacactgctaggacacgaacagggaat
gcaagtcaggatatcaggctccccaaaaagtttgacctgcccctcgctgtgatgccctca
gtggaggatgaaaagccagcacaccctgagggccagaagatgacaacgtggaagggaagt
agccaggtgggaagccagagtagcccaccttccccctccactgggttgctcagaaacttt
aaggacaatggcccaggtaccttacccaagatgaaggctaaggctgccctggaggaaagg
gcccctgacaaagacaggggacaggggacattcactcttttgaagtctgtgttttggaag
aaagagcacaagaggactgtcaggactgagagctcaccaccagcacccccaatctccctg
gtgagtggccggctgagccctgccataaatgtgcatgcccgaggttcatccccagctctc
aggattcgagagagcccagccagaggcctgggcaaccacacggagagggacatccgatct
gcacccagctctctccacctcccccgaaaagccagcaggccccctcgaaccagtacagct
ggcacctcacaaaggaccattcctggggaacagacttcttatggcaccctgcagagagtg
aaataccacactctttccttaagtcgaaagaaatccttacctgagtccagcttctga
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