Arvicanthis niloticus (African grass rat): 117712469
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Entry
117712469 CDS
T08817
Symbol
Prom1
Name
(RefSeq) prominin-1 isoform X1
KO
K06532
prominin 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
117712469 (Prom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117712469 (Prom1)
04090 CD molecules [BR:
anu04090
]
117712469 (Prom1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117712469 (Prom1)
CD molecules [BR:
anu04090
]
Proteins
117712469 (Prom1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
DUF2207_C
Tweety
DUF1664
SUR7
Baculo_PEP_C
ApoLp-III
CCDC3_C
Exonuc_VII_L
ATG17_like
MtrB
Fez1
Motif
Other DBs
NCBI-GeneID:
117712469
NCBI-ProteinID:
XP_034364157
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All DBs
Position
7:complement(47756068..47895529)
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AA seq
894 aa
AA seq
DB search
MSRKGPFPLSFHKVPHAWEIRPTMALGFSVLLLLGLCGKLASGQPAFDNTPGALNYELPT
TEYETQDTFNAGIVGPLYQMVHNFLNVVQPNDFPLDLIRKLIQKKFDISVDSKEPENIVL
ALKAALYEIGVLICAILGLLFIILMPLVGFLFCMCRCCNKCGGEMHQRQKQNEPCQRKYL
GISLFVICLLMSLGIMYGFVANQQTRTRVKRTQKLAESNFRDLETLLTETPKQIDYILEQ
YTNTKNKAFSDLDGIDSLLGGRIKDQLKSKVTPVLEEIKAMATVIKQTKNALQNMNSSLK
SFQDASTQLSTNLTSVRNSIENSLNSSDCASDPASKICDSLRPGLSNLGSNYNSSQLPSV
DKELNTINDVDRTDLENLVKRGYTSIDEIPDMIQNQTVDVIKDVKKTLDSISSDVKNMSQ
SIPIEEVLSQVSHYLNNSNRYFHQEIPKLEEYDSYWWLGGLIVCFLLTLIVTFFFLGLLC
GMYGYDKHATPTRRGCVSNTGGIFLMAGVGFSFLFCWILMILVVLTFVVGANVEKLLCEP
YENKKLLQVLDTPYLLKEQWQFYLSGMLLNNPDINMTFQQVYRDCKRGRGVYAAFQLENV
FNISENFNIEKLSENIVKELENLNVNIDNIELLDNTGRKSLEDFAGSGIDAISYSTYLEE
AEKSPTKVDLLTFASSLEAKANQLPEGKLKQALLKDAQNIRAIHQQHIPPVQQSLKFMRV
RNTLKQSVRTLEQTSNKLPEKVKKILASLDSAQSFLTNNISSIVIGETKKFGRTIIGYFE
HYLQWVLYAITEKMTPCKPMTTAMDSAVNGILCGYVADPLNLFWFGIGKATALLLPAVII
ATKLAKYYRRMDSEDVYDDVETVPMKNLENGSNGYHKDHLYGVHNPVMTSPSRY
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaaggcccatttcccttgagcttccacaaagtacctcatgcttgggagatc
aggccaactatggctcttggattcagtgtcctgctgttgctggggttgtgtggaaagctc
gcttcaggtcagcctgcattcgataacactcctggggctttgaattatgaattgcctacc
acagaatatgagacccaagacaccttcaatgccgggattgttggccctctctaccaaatg
gttcacaacttcctcaacgtggtgcagccgaatgacttccctctagatttgatcagaaaa
ctcatacagaagaagtttgacatctcagttgattccaaggagccagaaaacatagtcttg
gctctgaaggctgccctctatgagatcggagttcttatctgcgccatcctgggactgctg
ttcatcatcctcatgcctctcgtgggcttcctcttctgtatgtgccgttgttgcaacaag
tgcggcggagagatgcaccagcggcagaagcagaatgagccatgccagaggaagtaccta
ggcatctccctctttgtgatttgtctgctcatgagccttggcatcatgtatggttttgtg
gccaaccagcagacaaggactcgcgtcaaaaggacccagaaactggcagagagcaatttc
agagacttggaaacactcctgactgaaaccccaaagcaaattgactacatattggagcag
tacaccaacaccaagaacaaggcattctcagacctggacggtatcgattctctactggga
ggcagaataaaggaccaactaaaatccaaagtaactccagttctcgaagagattaaggcc
atggcaacagtcatcaaacagaccaagaatgccctgcagaacatgaacagcagcctgaaa
agtttccaggatgcaagcacccagctcagtaccaacctgacctctgtgagaaacagcatc
gagaattcactcaacagcagtgactgtgcttcagatccagccagcaagatctgtgatagc
ctcagaccagggctgagcaatctggggagcaattacaactcgagtcagctcccatcagtg
gataaagaactcaacaccattaatgatgtcgacagaactgatctggagaatctcgtcaaa
agggggtatacgtcgattgatgaaatacccgatatgatacaaaaccaaactgtggatgtc
atcaaagatgtcaagaagaccttggattccattagctccgacgttaagaacatgagccaa
agtattcctattgaggaggtgctgtctcaggtctcccactaccttaataatagcaacaga
tacttccaccaggagatacctaaactggaagaatacgactcatactggtggctgggtggc
ttaattgtctgcttcctgttgaccctcattgtgactttctttttcctgggcttgctgtgt
ggtatgtatggctatgacaagcatgccaccccaaccagaagaggctgcgtgtccaacact
ggaggcatcttcctcatggctggggttggattcagcttccttttttgctggatattgatg
atccttgtggttcttacttttgttgttggtgcaaatgtggaaaagttgctctgtgaacct
tatgaaaacaagaaactattacaggtcttggacactccctacctgctcaaggaacaatgg
caattctatctctctggcatgctgctcaataacccagacattaacatgacctttcagcaa
gtctacagggattgcaaaagaggtcgaggtgtgtatgctgcttttcagcttgagaatgtc
ttcaacatcagtgagaatttcaacattgagaagctttctgaaaacatagtcaaggagctg
gagaatctaaatgtgaacatagataacatcgaactgttggataacacaggaaggaagagc
cttgaggactttgcaggttctgggatagatgcaatcagttattccacgtacttggaggag
gccgagaaatcccctaccaaagtggatctactgacatttgcctcttctctggaagcaaaa
gcaaaccagttgcctgaagggaagttgaaacaggccttgctaaaggatgcacagaatatt
agagccatccaccagcaacacatccctcctgtgcagcagtcactgaaatttatgagggtg
aggaatactttaaaacaaagtgtcaggacccttgagcaaacaagcaacaagttgccggag
aaagtgaagaagattcttgcctctttggattctgctcagagtttccttaccaataacatt
tcctccatcgttattggagagacgaagaagtttgggagaacaataataggctactttgaa
cattatctgcagtgggtcttgtacgccatcacagagaagatgacaccctgcaaacccatg
accaccgcaatggactctgctgttaatggcattctgtgtggctatgttgctgaccctctg
aatttgttctggttcggcatagggaaagccacggcactcttacttcctgctgtaatcatt
gctaccaagctggccaagtactaccgcaggatggattcagaggacgtatatgacgatgtt
gagactgtacctatgaaaaatttggaaaacggtagtaatggttatcataaagatcattta
tatggtgttcacaatcctgttatgacaagcccgtctcgatactga
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