Arvicanthis niloticus (African grass rat): 117712480
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Entry
117712480 CDS
T08817
Symbol
Sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X3
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117712480 (Sorcs2)
Membrane trafficking [BR:
anu04131
]
Protein recycling
Others
Others
117712480 (Sorcs2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
SorCS_stalk
PKD
PKD_4
BNR_6
DUF6242_C
Motif
Other DBs
NCBI-GeneID:
117712480
NCBI-ProteinID:
XP_034364190
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Position
7:complement(40750835..41201168)
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AA seq
1161 aa
AA seq
DB search
MAHRGLPSAPKRPGPTAPDRSFQALPPLCWPRSWPLLLLLLLVLVAACGAMGCSPQTQRQ
SPSVQVTRLLSTGRTESGNRKDPQARESEPSAPSLGPGSVSGPSTDGAPAPGKGRRARAA
PVAGAASASRAQVSLISTSFVLKGDATHNQAMVHWTGENSSVILILTKYYHADMGKVLES
SLWRSSDFGTTYTKLNLQPGVTTVIDNFYICPANKRKIILVSSSLGDREQSLFLSSDEGT
TFQKYPVPFLVETLLFHPKEEDKVLAYTKDSKLYVSSDLGKKWTLLQERVTKDHVFWAVS
GVDDDPNLVHMEAQDLSGGYRYYTCLIHNCSAQPHTAPFSGPIDRGSLTVQDEYIFLKAT
STNRTKYYVSYRRSDFVLMKLPKYALPKDLQIISTDEQQVFVAVQEWNQVDTYNLYQSDL
RGVRYSLVLENVRSSRQAEENVVIDILEVRGVKGVFLANQKVDGKVTTVITYNKGRDWDY
LRPPSTDMNGKPTNCQPPDCHLHLHLRWADNPYVSGTVHTKDTAPGLIMGAGNLGSQLVE
YKEEMYITSDCGHTWRQVFEEEHHVLYLDHGGVIAAIKDTSIPLKILKFSVDEGHTWSTH
NFTSTSVFVDGLLSEPGDETLVMTVFGHISFRSDWELVKVDFRPSFPRQCVEDDYSSWDL
TDLQGDHCIMGQQRSYRKRKFTSWCVKGRSFTSALTSRVCKCRDSDFLCDYGFERSSSSE
STANKCFANFWFNPLSPPEDCVLGQTYTSSLGYRKVVSNVCEGGVDLQQSPVQLQCPLQA
PRGLQVSIRGEAVAVRPREDVLFVVRQEQGDVLTTKYQVDLGDGFKAMYVNLTLTGEPIR
HHYESPGIYRVSVRAENMAGHDEAVLFVQVNSPLQALYLEVVPVIGINQEVNLTAVLLPL
NPNLTVFYWWIGHSLQPLLSLDNSVTTRFTDAGDVRVTVQAACGNSVLQDSRLIRVLDQF
QVVPLQFSRDLDAFNPNTPEWREDVGLVVTRLLSKETSIPEELLVTVVKPGLPTIADLYV
LLPPPRPTRKRSLTSDKRLAAVQQALNSRGISFILRGGLRILVELRDTDAGPQRPGGSGG
YWAVVVLFVVGLFAVGAFILYKFKSRKRPGRTVYAQMHNEKEQEMTSPVSHSEDAQSAMQ
GNHSGVVLSINSREMHSYLVG
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccggggactcccgagcgccccgaaacgtcctggccctactgcgccggaccgg
agctttcaagctctgccgccgctgtgctggccacgttcgtggccgctgctgctgctgctg
ctgctggtgctggtggctgcctgcggagcgatggggtgctccccccagacccagcgccag
agtcccagtgtgcaggtcaccaggctgctgtccacgggacgcacagagtccggcaatcgc
aaggatccgcaggcacgagaatcggagcccagcgccccgagtctgggtccgggttctgtt
tcaggtcccagcaccgatggcgccccagctccgggcaaggggcgcagggctcgggcggcg
ccagtggccggtgcggcttcggcttcgcgcgcacaggtctcgctcatcagcacgtcgttc
gtgctcaagggagacgcgacgcacaaccaggcgatggtacactggacaggagagaatagc
agcgtcatcttgatcctgacaaagtactaccatgcagacatggggaaggttctggaaagt
tctctgtggaggtcctcagattttgggacaacctacaccaagcttaatctccagcctggt
gtcaccactgtcatcgacaacttctatatctgcccagctaacaaaagaaagatcatcctg
gtgagctcatccctcggtgaccgggaacagagcctcttcctcagcagtgatgagggcacc
acgttccagaagtatcctgtccccttcctcgtggagactctcctcttccacccaaaggaa
gaagacaaggttcttgcctacactaaggacagcaagctgtatgtgtcgtcagacctgggg
aagaaatggacacttcttcaggaacgggtgaccaaggaccacgtgttctgggctgtgtct
ggggtggatgatgaccccaacttggtccacatggaagctcaggacctcagtggaggctat
cgatactatacgtgtctgatccacaactgctcagcccagccacacacagcacccttctct
ggccccatcgaccgtgggtccctgaccgtgcaggatgagtacatctttctgaaggcaaca
tcaacaaaccgaaccaaatactatgtctcctatcgccgcagtgactttgtcctgatgaag
ctgcccaagtatgccctgcccaaggacctacagatcatcagcacggatgagcagcaggtg
ttcgtggccgtacaggagtggaaccaggtagacacctataacctgtaccagtcagacctg
cgtggagtgcgctattcactggtgctggagaatgtgcgcagctcgaggcaggctgaggag
aacgtggtcatcgacattctcgaggtcagaggggtgaagggagtcttcttggcaaaccag
aaagtggatggcaaggtgacaacagtcataacctacaataagggccgtgactgggattac
ctgaggccacccagcactgacatgaatgggaaacccaccaactgccagccgccggactgc
cacctgcatctgcacctgcgctgggcagacaacccctatgtgtcaggcacggttcacacc
aaggacactgcccctggcctcatcatgggtgcaggtaacctgggctcacagctggtggag
tataaagaggaaatgtacatcacatctgactgcgggcacacctggaggcaggtctttgag
gaagagcaccacgtactgtacctggaccatggtggtgtcattgctgccatcaaggacacc
tccatccccctgaagatcctcaagttcagcgtggatgagggccacacttggagcacgcac
aacttcaccagcacctcagtgttcgtggatgggctgctgagcgaaccaggggatgagaca
cttgtcatgacggtctttggccacatcagcttccgctctgactgggagctggtcaaggtt
gacttccgtccctccttcccccgacagtgtgttgaggatgattacagctcctgggacctc
actgacctccagggtgaccactgtatcatgggccagcagagaagttaccggaagagaaag
tttacatcctggtgtgtcaaggggaggagcttcacgtcagcactcacatcacgtgtgtgc
aagtgccgggactccgacttcctctgtgactacgggtttgagcgctcgtcttcctcagag
tccactgccaacaagtgctttgccaacttctggttcaaccctttgtcccctcctgaagac
tgtgtcctgggccagacctataccagtagccttgggtaccggaaggtggtgtccaatgtg
tgtgaaggtggtgtggacctgcagcagagcccagtgcagctgcagtgccccctacaagca
ccccggggcctgcaggtgagcatccgaggagaggcagtggctgtgcggcctagagaagac
gtgctgtttgtggtgcggcaggaacagggtgatgtcctgaccactaaatatcaggtggat
cttggcgacggcttcaaggccatgtatgtgaaccttactctgacaggagagcccattcgg
caccactacgagagtcctggcatctaccgcgtgtccgtcagagctgagaacatggcaggc
catgatgaagctgtgctctttgtccaggtcaactctcctctgcaggccctctacctcgag
gtagtccctgtcattggcatcaaccaggaagtgaacctcacagccgtgctgttacccttg
aaccccaacctcactgtcttctactggtggatcggccacagcttgcagcctctactttcc
ttggacaactcggtgacaacaaggtttacggatgctggggacgtgcgtgtgacagtacaa
gctgcctgtggtaactcggtacttcaggactccaggctcatccgtgtgctcgatcagttc
caggtggtgcctctgcagttctccagggacctggatgcctttaaccccaacacgcctgaa
tggagggaggacgtgggactggtggtcacccgacttctctccaaggagaccagcatccca
gaggagctgctagtgactgtggtaaagccagggctgcccaccatagcggatctgtatgtg
cttctgcctcctcccaggcccacaaggaagaggagcctcacaagtgacaagagactggca
gctgtgcagcaggcactgaactcacgcgggatcagctttatccttcgaggagggcttcgt
atcctggtggagctgagagacacagatgcaggtcctcagaggccaggtggcagtggtggc
tactgggccgtggtggtcctctttgtcgttgggctgtttgcagtaggagcattcatccta
tacaagttcaaaagcaggaaacgtccaggcaggacggtgtacgcccagatgcacaatgag
aaagaacaggagatgacaagtcccgtgagccacagtgaggatgcccagagcgccatgcag
ggcaaccactcaggtgtggtcctgagcatcaactctcgtgagatgcatagctacctggtg
ggctga
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