Arvicanthis niloticus (African grass rat): 117712550
Help
Entry
117712550 CDS
T08817
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117712550 (Exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117712550 (Exosc1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117712550 (Exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117712550 (Exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
117712550
NCBI-ProteinID:
XP_034364352
LinkDB
All DBs
Position
1:complement(148397406..148407644)
Genome browser
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMRETE
SQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacctgtgaggtactgcatcccgggcgaacgtctgtgtaacttggaggaaggc
agccccggcagcggcacctacactcggcacggctacatcttttcgtcgctggctggctgc
ctgacgaagaccagcgagaatggcgcgcttcctgtggtgtcagtgatgagagaaacagag
tcccagttacttcccgatgtgggagctgttgtcacctgtaaggtctctagcatcaactca
cgatttgccaaagtacacatcctgtatgtgggctccacgccacttaaaaatgctttccga
ggaactatccgcaaggaagacatccgggcaactgaaaaagacaaggtagaaatttacaag
agtttccggccaggtgacatagttttggccaaagttatctccctaggtgatgcacagtcc
aattacctgctgactactgctgaaaatgagttaggagttgtggtggcccacagtgagtca
ggtgtccagatggtccccatcagctggtgtgagatgcagtgccccaagacccacactaaa
gaattccgaaaagttgccagagtacagcccgagttcttacaaacctaa
DBGET
integrated database retrieval system
