Arvicanthis niloticus (African grass rat): 117712585
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Entry
117712585 CDS
T08817
Symbol
Dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117712585 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117712585 (Dhx15)
03009 Ribosome biogenesis [BR:
anu03009
]
117712585 (Dhx15)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117712585 (Dhx15)
Spliceosome [BR:
anu03041
]
Complex A
U2 snRNP components
U2 related factors
117712585 (Dhx15)
Complex B
117712585 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117712585 (Dhx15)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
90S particles
Helicases
117712585 (Dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
117712585
NCBI-ProteinID:
XP_034364436
EnsemblRapid:
ENSANLG00005007768
LinkDB
All DBs
Position
7:complement(54995786..55036741)
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRERDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaggcatcggttggacctgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaggaccgagaacgagatcgggatagagaggaccgatctaaagatcgt
gaccgtgaacgtgatagaggagacagagagcgggagagggagaaagaaaaggaaaaggaa
ttgagagcttccaccaacgctatgcttatcagtgctggattgccacctttaaaagcttct
cattcagctcattcaacccactcggctcattcaacacattctacacattctgcccattca
acacacacaggacacgcaggacacacatcgcttccacagtgcattaatccatttactaac
ctgccccatactcctcgatattatgatattctaaagaaacgacttcagctccctgtttgg
gaatacaaggatagatttacagatattcttgttagacatcagtcatttgtactggttggt
gagactgggtctggtaaaacaacacagataccacagtggtgtgtggagtatatgcggtcc
ttgccaggacccaaaagaggagttgcctgtacacagcccaggagagtggctgcaatgagt
gtggctcagagagtcgctgatgagatggacgtgatgttaggtcaggaagttggatactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgacgggatg
ctacttcgtgaagccatgaacgatcccctcctggagcgttatggtgtgataattcttgat
gaggcccatgaaagaacattggctacagatattctcatgggtgttctaaaggaagttgta
agacagagatcagatttaaaggttatagttatgagtgctaccctagatgctgggaaattc
cagatttactttgataactgtcctctcttaactattcctggacgaacacatcctgttgag
attttttatactccagaaccagagagagattatcttgaagcagcaattcggacggtgatc
cagatacatatgtgtgaagaggaggaaggagatcttcttctttttttgactggtcaagag
gaaattgatgaggcctgtaagagaataaagcgtgaagttgatgatttgggccctgaagtt
ggtgatattaaaatcattcctttgtattctacacttccaccccagcagcaacaacgcatt
tttgagccaccacctccaaaaaaacagaatggagcaattggaagaaaggtggttgtgtca
actaatattgcagagacctctttgacaatagacggtgtggtgtttgtaattgaccctgga
tttgcaaaacaaaaggtatataatcctagaatcagagttgagtctcttttggtgacagca
attagtaaagcttcagctcagcaaagggctggtcgagctggacgtaccagacctgggaaa
tgcttcaggctttacacagagaaagcttataaaacagaaatgcaggataatacctatcct
gagattctacgttctaatttaggatcagttgtattacaactgaagaagcttggtattgat
gacttggtacattttgattttatggacccaccagctcctgaaactctgatgagagcccta
gaacttttgaattatttggctgctttaaatgatgatggagatctgactgaattgggatcc
atgatggcagagtttcctttagatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccacgcttttaaacaaaatcatgaatct
gttcagtggtgttatgacaacttcattaactaccggtccctgatgtctgcagacaatgta
cgccagcagctatcaagaattatggacagatttaatttgccccgtcgaagtactgatttc
acaagcagggactattacattaatataagaaaagctttggttactgggtattttatgcag
gtggcacatttagaacggacagggcattacctaactgtgaaggataaccaggtggtccag
ttgcatccctctactgtgctggaccacaagcctgagtgggtgctttataatgagtttgtg
ctgacaacaaaaaattatatccggacatgtacagatatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagaggcagttg
gaccgcattattgccaagcttcaatccaaggaatattcccagtactga
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integrated database retrieval system
