Arvicanthis niloticus (African grass rat): 117712592
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Entry
117712592 CDS
T08817
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03030
DNA replication
anu03410
Base excision repair
anu03420
Nucleotide excision repair
anu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117712592 (Rfc1)
03410 Base excision repair
117712592 (Rfc1)
03420 Nucleotide excision repair
117712592 (Rfc1)
03430 Mismatch repair
117712592 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anu03032
]
117712592 (Rfc1)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117712592 (Rfc1)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117712592 (Rfc1)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117712592 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
RuvB_N
AAA_22
Rad17
AAA_14
AAA_5
AAA_33
AAA_16
AAA_30
AAA_18
Zeta_toxin
AAA_17
nSTAND3
AAA_7
RNA_helicase
NTPase_1
NPHP3_N
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
117712592
NCBI-ProteinID:
XP_034364452
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All DBs
Position
7:complement(66734928..66808511)
Genome browser
AA seq
1133 aa
AA seq
DB search
MDIRKFFGVISSGKKAENETVKKNEKTKPSEGTVKGKKGVKEAKVNNSCKEDASRPKQHS
KKKRIIYDSDSESEETVQVKNAKKKSEKLPLSSKPGKISRKDPVTYISETDEDDDFVCKK
AASKSKENGVSTNSYLGASNVKKSEENSKTKNKPLSPIKLTPTSVLDYFGTESVQRSGKK
MVASKRKESSQNTDDSILNDEAIAKQLQLDEDAELERQLHEDEEFARTLALLDEEPKIKK
ARKDPEEGESFSPVQADLSKAEKQKSPNKAEHFSNRRKTYSPAKHGKGGGSEDTKQPCKS
AHQKEACSSPKASSKLALMKAKEESSYRETELLAARRKESAIEPKGEKTTPRKTKSSPTK
RESVSPEDSEKKRANYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIER
EEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKILDEDGLLDLIRTMP
GKKSKYEIAAEAEIMKEKSKLERTPQKKDQGKRKISPTKKESESKKSKLTPLKNSPVKAI
KKEAGVCPRGLDIKEPHGSRSGDKEECLLWVDKYKPTSLKNIIGQQGDQSCANKLLRWLR
NWHKSSPEEKKHAAKFGKLATKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELN
ASDTRSKNSLKAVVAESLNNTSIKGFYTSGAAPAVSSRHALIMDEVDGMAGTEDRGGVQE
LIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIP
PPAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRAKKDIRLGPFDVARKVF
AAGEETAHMSLMDKSDLFFHDYSISPLFVQENYLHVKPVAAGGDMKKHLMLLSRAADSIC
DGDLVDNQIRSKQNWNLLPTQAIYASVLPGELMRGYMTQFPSFPSWLGKHSSTGRHDRIV
QDLSLHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGVEGVQHVVTLMDTYYLMKEDFE
NIMEVSSWGGKPSAFSKLDPKVKAAFTRAYNREAHLTPYSLQVVKTSRPSIGPALDSEYN
EELQEDDTQSDEKEQDAIETDAMIKQKKTRSSKPSKSEKEKESKKGKGKNWKK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggggttatatcaagtggaaaaaaggctgaaaacgagaca
gtaaagaagaatgagaagacaaaaccttcagagggaactgtcaaagggaagaagggggta
aaggaagccaaggttaataactcctgtaaagaggatgcctccagaccaaagcagcacagc
aagaagaagaggatcatctatgattcagattcagaatcagaggagacagtgcaagtaaaa
aatgctaaaaagaaatcagaaaaattgccactgtcttctaagcctggtaaaatctctcgg
aaggatcctgttacttacatttctgagacagatgaagacgatgactttgtatgtaaaaag
gcagcctccaaatcaaaagagaatggagtatctacaaatagttaccttggagcatcgaac
gtgaagaagagcgaagagaacagtaagaccaagaataaaccgttatctccaataaaactc
acaccaacttcagtgcttgattattttggaactgaaagtgtccagagatctgggaagaag
atggtggcaagcaaaaggaaagagtcttctcaaaacacagatgattccatattaaatgat
gaggccatcgccaagcagctgcagcttgatgaagatgcagagctggagaggcagttgcat
gaagatgaagaatttgcaagaacactggccttgttggatgaagaacccaagatcaaaaag
gcccgtaaggaccctgaagagggagaatcattttcacctgtccaagctgatttaagcaaa
gcagaaaagcagaaaagccctaataaagcagagcatttctcaaacagaagaaagacctac
agtcctgctaagcatggcaagggtggaggctcagaagacactaagcagccctgcaagtca
gctcaccagaaggaagcctgttcctcccccaaggccagctccaaactggctcttatgaaa
gcaaaagaagagagttcttacagagaaacagagctgctggctgcaagaagaaaagaaagc
gccattgagcccaaaggagagaaaacaactcctaggaaaacgaaaagttctccaactaag
agagagtctgtaagcccagaagattctgaaaagaagcgtgctaattatcaagcttaccga
agctacttaaatcgagaaggtcccaaagctctgggctccaaagaaatacccaagggagct
gaaaattgcttggaaggcctgacgtttgtgatcacaggagtgctggagtccattgaacgg
gaagaagccaagtctctaatcgaacgttatggggggaaagtaaccggaaatgtgagcaag
aaaaccaactacctcgtcatgggccgggacagtgggcagtccaagagtgacaaggcagca
gctctgggaacaaaaatccttgatgaagatggcctgttggatctgattcgaactatgcca
ggcaagaagtccaagtatgaaatagctgctgaggctgagataatgaaagaaaagtctaaa
ttggagcgaaccccccaaaaaaaggaccaaggaaaaagaaaaattagtccaaccaagaag
gagtcagagtctaaaaagagcaagctgactcccctaaagaacagtcctgtgaaggcaata
aagaaagaggcaggtgtgtgtcccaggggcctggatatcaaggagccgcatggcagccgc
agtggcgacaaagaggagtgcctgctctgggtggataagtacaagcccacctcactcaag
aacataatcggacagcagggtgaccagagctgtgccaacaaactgctacgctggctcaga
aactggcacaagagttctcctgaagagaaaaaacatgcagcaaagtttggcaaacttgcc
accaaagatgatggctccagtttcaaggcagctctgctgtctggccctccaggtgttggc
aaaaccactacagcttctcttgtgtgtcaggaattgggctacagttacgtggaactaaat
gcaagtgatactcggagtaagaacagtttgaaagcagttgttgctgaatcattgaacaac
accagcatcaaaggcttttatacaagtggtgcagctcctgccgtgagttcgaggcatgct
ctcatcatggatgaggtcgatggcatggcgggcactgaggacaggggcggagttcaggag
ctaataggcctgataaagcatactaaaattcccatcatttgtatgtgcaatgatagaaat
caccccaaaattcgctcattggttcattattgttttgatcttcgtttccaaagacctcga
gttgaacagattaagagtgcaatgctgtctattgcatttaaagagggtttaaagatcccc
cctccagctatgaatgaaataattttgggagctaatcaagatgtaagacaggttttacac
aatctcagtatgtggtgtgcacaaagtaaggccctaacctatgaccaagccaaggccgat
tctcagagggccaagaaggatatcagactgggcccatttgatgttgcccggaaagtgttt
gcagctggagaggagactgcacacatgtcactgatggacaaatcggatctctttttccat
gactattccatatcacccctctttgttcaggagaactacctccatgtaaagcctgtggct
gcagggggtgacatgaagaagcacttgatgcttttaagccgggcagcagatagcatatgt
gatggcgacttagtggacaatcagatccggagtaagcaaaactggaatcttctgcccaca
caggccatttacgccagtgttcttcctggagaattgatgcggggctacatgactcagttt
cccagcttcccaagctggctggggaagcactcgtctacgggcagacatgatcggattgtt
caggacctatccttgcacatgagtcttagaacttattccagcaaaaggacagtgaacatg
gattatctgtcacacatcagagacgcacttgtacaacccttgacctcacaaggggtagaa
ggggttcagcatgttgtcacacttatggacacatactatttgatgaaagaagattttgag
aacatcatggaagttagcagctgggggggcaaacccagtgccttttccaagctggatccc
aaggtaaaagcagccttcacaagagcctacaatagggaggcccacctgaccccatactca
cttcaggtagtaaagacatcgaggcccagcataggcccagcactggattctgaatacaat
gaggagttacaggaagatgacactcagtctgatgagaaagagcaggatgcaatagagact
gatgccatgatcaagcagaaaaagacaagatcttcaaagccttcaaaatcagaaaaagag
aaggagtccaaaaaaggaaaaggaaaaaattggaagaaatga
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integrated database retrieval system
