Arvicanthis niloticus (African grass rat): 117712631
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Entry
117712631 CDS
T08817
Symbol
Rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117712631 (Rnf4)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117712631 (Rnf4)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117712631 (Rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-UDP
Prok-RING_4
zf-RING_4
zf-rbx1
zf-C3HC4_4
zf_RING_Vps8
Rtf2
TerY_C
zf-RING_11
zf-RING_16
TRAF3_RING
IBR_1
zf-RING_10
zf-P11
DZR
zf-RING_6
FAM216B
zf-RING_Vps41
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117712631
NCBI-ProteinID:
XP_034364552
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All DBs
Position
7:39068650..39088343
Genome browser
AA seq
194 aa
AA seq
DB search
MSTRNPQRKRRGGTVNSRQTQKRTRETTSTPEISLEAEPIELVETVGDEIVDLTCESLEP
VVVDLTHNDSVVIVEERRRPRRNGRRLRQDHADSCVVSSDDEELSRDKDVYVTTHTPRST
KDDGATGLRTSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTC
RKKINHKRYHPIYI
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaagaaatcctcaaagaaagcggcgtggtggaaccgtgaattctagacaaacc
cagaagcgaactcgggaaacaacttcaacccctgagatttccttggaagcagaacccata
gaacttgtggaaactgttggagatgaaatcgtggacctcacctgtgaatctttagagcct
gtggttgtggacctgactcacaatgactctgttgtgattgttgaagaaaggagaaggcca
aggagaaatgggaggaggttgcgccaagaccatgctgacagctgtgtggtgagcagtgat
gatgaggaactgtctagggacaaagatgtgtacgtgactacccatactcctcgaagcacc
aaggatgatggcgctactggactcaggacctcgggtactgtcagctgtccgatctgcatg
gatggatattctgagattgtgcagaatgggcgtctcattgtttctacagaatgtggccac
gtcttctgtagccagtgcctccgtgattcccttaagaatgctaacacttgcccaacttgt
aggaaaaagatcaaccataaacgataccaccccatttacatatga
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