Arvicanthis niloticus (African grass rat): 117712657
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Entry
117712657 CDS
T08817
Symbol
Pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117712657 (Pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117712657 (Pnpt1)
03016 Transfer RNA biogenesis [BR:
anu03016
]
117712657 (Pnpt1)
Enzymes [BR:
anu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
117712657 (Pnpt1)
Messenger RNA biogenesis [BR:
anu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
117712657 (Pnpt1)
Transfer RNA biogenesis [BR:
anu03016
]
Prokaryotic type
tRNA degradation factors
117712657 (Pnpt1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-GeneID:
117712657
NCBI-ProteinID:
XP_034364614
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All DBs
Position
7:complement(14513009..14545830)
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AA seq
787 aa
AA seq
DB search
MAACRQCCLNLWLRPLGCGPLRPLGRPGRDRALSYLQVRALWSGTGSRAVTVDLGHRKLE
ISSGKLARFADGCAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYL
RREIGSSDKEILTSRVIDRSIRPLFPAGYFYDTQVLCNLLAVDGINDPDVLAVNGASVAL
SLSDIPWNGPVGAVRIGMIDGECVVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENIL
QQDFCHAIKVGVKYTQQIIQGIQQLVKEIGVAKRTPQKIFTPSAEIVKYVHTIAMEKLYA
VFTDYEHDKVSRDEAVNKIRLDTEEHLKEKFPEADQFEIIESFNVVAKEVFRSIILNEYK
RCDGRDLTSLRNISCEVDMFRTLHGSALFQRGQTQVLCTVTFDSLESSIKSDQIITAING
VKDKNFMLHYEFPPYATNETGKVTGVNRRELGHGALAEKALCPVIPKDFPFTIRVTSEVL
ESNGSSSMASACGGSLALMDAGVPISSAVAGVAVGLVTKTNPEKGEIEDYRLLTDILGIE
DYNGDMDFKLAGTNKGITALQADIKLPGVPIKIIMEAIQQASVAKKEILQTMSKTISKPR
ASRKENGPVVETIKVPLSKRAKFIGPGGYNLKKLQAETGVTISQVDEETFSIFAPTPTAM
HEARDFITEICRDDQEQQLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNSQLDQRKI
KHPTALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTVLKTLNDRSSIVMGEPISQ
SSSSSSP
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctgcaggcagtgctgcttgaacctatggctccgaccgctgggctgcggcccc
ctccgccccctcggccggcccgggcgggatcgggcactcagctatttgcaggtgcgagcg
ctgtggagtggcaccgggtccagggcggtgactgtggacctgggacacagaaaattagaa
atatcctctgggaaactggcaagatttgctgatggctgtgctgtggtacagtcaggtgat
actgcagtaatggtcacagcagtcagcaaaacaaaaccttcaccttcccagttcatgcca
ctggtggtggactacagacagaaggccgctgcagcaggtagaatccccacaaactacctt
agaagagagattggctcttctgacaaagagattcttacaagtcgagtaatagatcgttca
attcgacctctctttccagctggctatttttatgatacccaggttctctgcaatctgcta
gcagtcgatggcatcaatgaccctgatgtcctagcagttaatggtgcttctgtagccctc
tccttatcagatatcccttggaatggacctgttggagcagtacgaataggaatgatcgat
ggagaatgtgtcgttaacccaacaaggaaagaaatgtcttctagcactttaaatttagta
gttgcaggagcacctaaaagccaaattgttatgttggaagcctctgcagaaaacattcta
caacaggatttttgccatgcaatcaaagttggggtgaagtatacacagcagataattcag
ggcatccagcagttggtaaaagaaatcggtgttgccaagaggacaccccagaagatattc
actccttctgcggagattgtgaaatacgtgcatacaattgccatggagaaactctatgca
gtttttacagattatgaacatgataaagtttccagggatgaagctgttaataagataaga
ttagatacagaggaacatctaaaggaaaaatttccagaggctgaccaatttgaaataata
gaatccttcaacgttgttgcgaaggaggttttcagaagcattattttgaatgaatacaaa
aggtgtgatggacgagatctgacttcacttaggaatataagttgtgaggtagatatgttt
agaacacttcatggatcagcactgtttcagagaggacaaacacaggtgctctgtactgtt
acatttgattcattagaatccagtattaagtcagaccaaattataacagctataaatggg
gtaaaagataaaaatttcatgctgcactatgagtttcctccttacgcaaccaatgaaact
ggcaaagttactggtgtaaatcgaagagaacttggacatggtgctcttgctgagaaagca
ttgtgtcctgttattcccaaagattttccttttaccataagagttacatctgaagtccta
gaatcaaatgggtcatcttctatggcatctgcatgtggtggaagtttggcattaatggat
gcaggagtcccaatttcatctgctgttgcaggtgtagcagtgggattggttaccaaaacc
aatccagagaaaggtgaaatagaagactatcgtttgctaacagatattctgggaattgaa
gattacaatggtgacatggacttcaaattagccggtacaaacaaaggaataactgcatta
caggctgatattaagttacctggagtaccaattaaaattataatggaagccatccaacaa
gcatcagtggcaaagaaggagatactgcagacaatgagcaaaacgatttcaaaacctcga
gcatctagaaaagaaaatggaccagttgtagaaacaataaaggttccactatcaaaacga
gcaaaattcattgggcctggtggatataacttaaaaaaactccaggctgagacaggtgta
acaattagtcaggttgatgaagaaaccttctccatatttgcaccaacacctactgcaatg
catgaggcaagagacttcattacagaaatttgcagagatgatcaagagcaacaattagaa
tttggagcagtttataccgctacaataactgaaatcagagacactggagtgatggtaaaa
ctgtatccaaacatgactgcagtgctacttcataattcacaacttgaccaacgaaagatt
aaacatcccactgccctaggattagaggttggccaagaaattcaggtcaaatactttggc
cgtgatccagctgatggaagaatgaggctttctcgtaaagttcttcagtctccagctaca
actgttctcaaaacattaaatgatagaagcagcattgtaatgggagagcctatttcacag
tcatcatccagttcttccccttaa
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