Arvicanthis niloticus (African grass rat): 117712665
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Entry
117712665 CDS
T08817
Symbol
Gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04080
Neuroactive ligand-receptor interaction
anu04082
Neuroactive ligand signaling
anu04723
Retrograde endocannabinoid signaling
anu04726
Serotonergic synapse
anu04727
GABAergic synapse
anu05032
Morphine addiction
anu05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117712665 (Gabrb1)
04082 Neuroactive ligand signaling
117712665 (Gabrb1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
117712665 (Gabrb1)
04726 Serotonergic synapse
117712665 (Gabrb1)
04723 Retrograde endocannabinoid signaling
117712665 (Gabrb1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
117712665 (Gabrb1)
05033 Nicotine addiction
117712665 (Gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117712665 (Gabrb1)
Ion channels [BR:
anu04040
]
Ligand-gated channels
GABA-A
117712665 (Gabrb1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117712665
NCBI-ProteinID:
XP_034364634
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Position
7:72588769..72981878
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AA seq
474 aa
AA seq
DB search
MWTVQNRESLGLLSFPVMVAMVCCAHSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPP
VDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQSANEKNKLEMNKVQ
VDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPLSSREGFGRGLDR
HGVPGKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYVH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagtacaaaatcgagagagtttggggcttctctcttttcctgtgatggttgcc
atggtttgttgtgcacacagctccaatgaacctagcaacatgtcatacgtgaaagagaca
gtggaccgactgctcaaaggatatgacattcgcttgcggccggactttggagggccccca
gtggacgtcgggatgcggatcgatgtcgccagcatagacatggtctcggaagtgaatatg
gattatacactcaccatgtatttccagcagtcttggaaggacaagaggctttcctattct
ggaatcccattaaatctgacccttgacaacagagtagctgaccaactctgggtaccagac
acctactttctcaatgacaagaaatcatttgtgcatggggtcacagtgaaaaaccgaatg
atcaggctgcatcctgatggaactgttctctatggactacggatcacaaccaccgcagca
tgcatgatggatcttcgaagataccctctggatgagcagaactgcaccctggagattgaa
agttatggctacaccactgatgacatcgaattttactggaatggaggagagggagcagta
actggggtcaataaaattgagcttccccaattttcaattgttgactacaagatggtgtcc
aagaaggtggagttcacaacaggggcatatccacgactatcactaagttttcgtctaaag
agaaacatcggttacttcattttgcagacctacatgccttccacactgattacaattctg
tcctgggtgtcgttttggatcaactatgatgcatctgcagccagagtcgcactaggaatc
accacagtgctgacgatgacaaccatcagcactcacctcagggagactctgccaaagatc
ccttacgtcaaagcgattgatatctatctcatgggctgttttgtgtttgtgttcctggct
ctactggaatacgcttttgtaaattacattttctttggaaaaggccctcagaaaaaggga
gcgagcaaacaagaccagagtgccaatgaaaagaacaaactggaaatgaacaaagttcag
gttgatgctcatggcaatattctcctcagcaccctggaaatcaggaacgagaccagtggt
tcggaggtgctcacgggtgtaagtgaccccaaggccaccatgtactcatacgacagcgcc
agcatccagtaccgcaagccactgagcagccgcgagggcttcgggcgtgggctggacagg
cacggggtgcccggcaaggggcgcatccgcagacgcgcgtcgcagctcaaagtgaagatc
cctgacttgactgacgtgaactccatagacaagtggtcccgaatgttctttcccatcacc
ttttcactttttaatgtcgtttattggctttactatgtacactaa
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