Arvicanthis niloticus (African grass rat): 117712733
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Entry
117712733 CDS
T08817
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117712733 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117712733 (Myo5c)
04131 Membrane trafficking [BR:
anu04131
]
117712733 (Myo5c)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117712733 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117712733 (Myo5c)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117712733 (Myo5c)
mRNA cycle factors
P-body specific factors
117712733 (Myo5c)
Membrane trafficking [BR:
anu04131
]
Others
Actin-binding proteins
Myosins
117712733 (Myo5c)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117712733 (Myo5c)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117712733 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
AAA_16
NPHP3_N
DUF6026
Motif
Other DBs
NCBI-GeneID:
117712733
NCBI-ProteinID:
XP_034364739
LinkDB
All DBs
Position
7:8532339..8598757
Genome browser
AA seq
1761 aa
AA seq
DB search
MEIPIQEVQPGERFCQLTFRVSLQVVCLYNRVWIPDPEEVWKSAEIAKDYRVGDRVLRLL
LEDGTELEYPVDPESLPPLRNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYS
GIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSG
ESGAGKTVSARYAMRYFATVSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKY
TEISFDERNQIIGANMRTYLLEKSRVVFQSENERNYHIFYQLCASAQQPEFKHLKLGSAE
EFNYTRMGGNTIIEGVNDRADMVETQKTFTLLGFKKDFQMDVFKILAAILHLGNVQVTTV
GNERSSVSEDDSHLKVFCELLGLETSTVAQWLCNRKIVTSSETVVKPMTRPQAINARDAL
AKKMYARLFHFIVERINQALHFSGKRHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQ
QFNLHVFKLEQEEYMKEDIPWTLVDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENW
LQKLYNNFINKNSLFEKPRMSNSSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEILRAS
KFHLCAAFFQESPVPSSPFGAMITVKSAKQVIKPNTKHFRTTVGNKFRSSLSLLMETLNA
TTPHYVRCIKPNDEKMPFEFDSKRIVQQLRACGVLETIHISAQSYPSRWTYLEFYSRYGI
LMTQQELSLSDKKEVCKVVLHRLIQDSNQFQFGRTKIFFRAGQVAYLEKLRLDKLRQDCI
VIQKHVRGWLQRRKFLRERQAALTIQQYFRGQQTVRKAITATALKEAWAAIILQKHCRGY
LVRNLYQLIRVATITIQAYTRGFLARRQYRKLLQEHKAVILQKYARAWLARRRFQNIRRF
VLNIQLTYRVQRLQKKLEDQSKENHGLVEKLTSLAALRVGDLEKVQKLEAELEKAATHRH
SYEEKGRKYRDTVEERLSKLQKHNAELELQREQAEQKLQEKTEELKEKMDKLTRQLFDDV
QKEEQQRLLLEKSFELKTQAYEKQIASLREEIKSLRDERSQLHHQLEEGRVTSESLKGEV
ARLSKQAKTISEFEKEIELLQAQKIDVEKLVQSQKREMRERMSEVTKQLLESYDIEDVRS
RFSVEDLEHLNEDGELWFAYEGLKKATRVLESHFQSQKDCYEREIEGLNFKVVHLSQEIN
HLQKLFREETDINESIRHEVARLTSENMMIPDFKQQISELERQRHDLESRLKEQAEKMEG
KLGEPFSHLNRVREEEGVQGEALEAQSQVYPEEERPMGKIQEPQEAIRFPKKQPEEAEEE
VESILQQEASRLSLENRDLEEELDMKDRMIRKLQDQVKTLTKMIEKANNVHLPSGSKEYL
GMLEYKKEDEAKLIQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMN
SAINGIKHVVKEHFEDLEMLSFWLSNTCHFLNCLKQYSGEEEFMKYNSPQQNQNCLNNFD
LTEYRQILSDVAIRIYHQFIIVMENNLQPIIVPGMLEYESLQGISGLKPTGFRKRSSSID
DTDAYTMTSILQQLSYFYSTMCQNGLDPEIVRQAVKQLFYLVGAVTLNSLLLRKDMCSCR
KGMQIRCNISFLEEWLKDKNLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEISQCCTSL
SAVQIIKILNSYTPIDDFEKRVNPSFVRKVQALLNNRGDSLQLMLDTKYVFQVTFPFTAS
PHALEMTQIPSSFKLGFLRRL
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggagattccaatccaggaagtacagccaggagaacgcttctgtcagctcacattccgt
gtcagccttcaggtcgtgtgtttgtacaacagggtttggatcccagatcctgaagaagtt
tggaagtcggctgaaattgcgaaggactacagagtgggtgatcgagtcctccgactcctg
ctagaggatggcacggagctggagtaccctgttgacccagagtcactgcctccacttcgg
aatccagacatcctggtgggtgagaatgatctcacagccctcagctacctccacgagcct
gcagtgctgcataacctcagaatccgcttcgcagagtctaaactcatctacacctacagt
ggaatcattttggtggccatgaatccttacaaacagctgccaatatatggggatgccatc
atccacgcctacagcggacagaacatgggtgacatggacccacacatctttgcagtggca
gaggaggcctacaaacagatggccaggaacaacagaaatcagtccataatcgtgagtggg
gaatccggagccgggaagactgtctctgcacgctatgccatgaggtactttgccactgtc
agcaaatccagcagcaatgcccatgtggaggacaaagtcctggcatccaatcccataaca
gaggctgttggaaatgcaaaaaccacccgcaatgacaacagcagtcggtttgggaaatat
acagaaatcagctttgatgagaggaaccagatcattggtgccaatatgagaacctacctc
ctggagaagtccagagttgtctttcagtcagaaaacgaacggaattaccacatcttctac
cagctttgtgcatccgcacagcagccagaatttaaacaccttaaactggggagtgcagaa
gaattcaactacacgagaatgggaggtaacactatcattgaaggtgtcaatgatagagct
gacatggtggagacccagaagaccttcacactactgggattcaagaaagattttcagatg
gacgtttttaagatcctagctgccatcctgcatctgggcaatgtgcaggtcaccacggtg
ggcaacgagaggtcttcagtcagtgaggatgacagtcacctgaaggtgttctgtgagctc
ttgggcctggagaccagtacagtggctcagtggctctgcaacagaaaaattgtgacctcc
tcggaaaccgtggtgaagcccatgacccggcctcaggccatcaatgccagggacgcactg
gccaaaaagatgtacgctcgcctgttccacttcatcgtagagcggatcaaccaggcgttg
cacttctcaggcaagcggcacacttttattggtgttttggacatttatggttttgagacc
tttgacgtaaacagctttgaacagttctgcatcaattacgctaatgaaaagctgcagcag
cagtttaacctgcacgtctttaaactcgagcaggaggagtacatgaaggaggacatcccg
tggactctggtagacttctatgacaatcaacctgttattgacctgatcgaagcaaaaatg
ggaattttggagttgctggatgaagaatgcttgttgcctcatggaactgacgaaaactgg
cttcaaaagctgtataacaattttatcaacaagaactctttattcgagaagcctagaatg
tcaaactcatccttcatcatccaacattttgctgacaaggtggagtaccagtgtgaagga
ttcctggagaagaacagagacactgtctatgacatgctggttgaaatcctcagagcaagc
aagtttcatctctgtgccgcattttttcaagaaagccctgttccatcctctccctttggg
gcaatgatcacagtcaagtctgcaaagcaggtcatcaagccgaacaccaagcacttccgg
accacagttgggaacaagttccgcagttctctgtccttgctcatggaaaccctcaatgcc
accacaccccactacgtccggtgcatcaagccaaatgatgagaaaatgccctttgagttt
gactccaaacggattgtccagcagctgcgagcctgtggtgttttagaaacaattcacatc
agtgcccagagctatccttccaggtggacatacctcgagttctacagtcgctatggcatc
ctcatgacccagcaggagctgtccctcagtgataagaaggaggtgtgcaaggtggttttg
cacaggctcatccaggattctaaccagttccagtttggtagaaccaaaattttcttcaga
gcaggacaagtggcttatttagagaaactccgcttggataaactgaggcaggattgtatt
gtgattcaaaagcatgtgcggggctggctgcagaggaggaagttcctccgggagaggcaa
gctgccctgacaatccagcagtacttccggggtcagcagacagtgaggaaggccatcact
gccactgctttgaaggaggcctgggcagccatcatcctccagaagcattgccgaggctac
ctggtccgtaacctgtaccagctgattcgtgtggccaccatcaccatccaggcatacacc
aggggcttcctggccaggaggcagtaccggaagttgctacaggagcacaaggcagtgatc
cttcagaagtatgcgagggcatggctggcccggcgcagattccagaacatccgcaggttc
gtgctcaacattcagctgacttacagggtccagcgattgcagaagaagctggaggatcag
agcaaagagaaccacggactggtggagaagctgaccagcctggcggctctgcgggttgga
gatctggaaaaggttcagaagctggaagcagagctggaaaaagcagctacacaccggcac
agctatgaagagaagggccggaaatacagggacacagtggaggagagattgtcaaagctg
cagaagcataatgcagagctggagttgcagagagagcaagcagagcagaagctgcaagag
aagaccgaggagctgaaagaaaaaatggacaagctcaccaggcagctgtttgatgatgtg
cagaaagaagaacagcaaagactacttcttgaaaaaagttttgagctgaaaacacaagcc
tatgagaaacagatagcgtctctgagagaagaaattaaatccctcagggatgagaggtca
cagctgcatcaccagctggaggagggacgggtcacctctgagagcctgaagggggaggtg
gcccgtctaagcaagcaggcaaagaccatctctgagtttgagaaggagatagagctgctg
caggcccagaagatagatgtggaaaaactcgtgcagtcacagaaacgggagatgagagaa
cggatgtcagaggtcaccaagcagcttttggagagctatgacattgaagacgttagaagc
aggttctccgtggaagacctggaacatttaaatgaagatggagaactttggtttgcctac
gaaggactaaagaaagcaactcgtgttctggagagccatttccagtctcagaaggattgt
tacgaaagagagattgaaggtctgaacttcaaagtcgtgcacctgagtcaagaaatcaac
cacctgcagaagctgttcagagaagagacagacatcaatgaaagtatccggcacgaagtc
gccaggctgacatcagaaaacatgatgatcccagactttaagcagcagatttcagagctg
gagaggcagaggcatgatcttgaatcccgcctgaaggagcaggccgagaagatggaagga
aagctgggagagccgttcagccacctgaaccgagtccgagaagaggagggagtgcagggc
gaggccctggaagcacagagtcaggtgtatcccgaggaggagaggcccatgggtaagatc
caagaaccgcaggaggccatcaggttcccaaagaagcaaccagaagaagccgaggaggaa
gtcgagagtattctccaacaagaggcgtcccggctctctttggaaaacagggatcttgag
gaagagttagacatgaaggacagaatgattagaaagctgcaggatcaagtcaagactctg
accaagatgattgaaaaagccaacaatgtgcacctgccctcaggatccaaggagtacctt
ggaatgctggaatacaagaaagaagatgaggcgaagctcattcagaacctcattcttgac
ctgaagccccgaggtgtggtggtgaacatgatccctgggctgccagctcacatcctgttc
atgtgcgtgcgatatgcagactccctgaacgatgccaacatgctcaaatccctcatgaac
agtgctattaatggcatcaagcatgtggttaaggaacattttgaagatttggagatgctg
tccttctggctttccaacacttgtcattttctcaactgcctgaagcagtacagtggagaa
gaggaattcatgaagtataacagcccacagcagaatcagaactgcttgaacaattttgat
cttacagaatacagacagattctgagtgatgtggctatacggatttaccatcagttcatc
atcgtgatggaaaacaacctccagccgatcatagtaccaggcatgctggagtatgagagt
ctgcagggcatttccggcctgaagcccactggtttccggaagcgctcatccagcatcgat
gacacagatgcgtataccatgacgtccatcctgcagcagctgagctacttctacagcacc
atgtgtcagaatggcctggaccccgagattgtgaggcaggcggtcaagcagctgttctac
ctggtcggggcggtgaccctcaacagcctcctcctgcgcaaggacatgtgctcctgcagg
aaaggcatgcagatcaggtgcaacatcagcttcttggaagaatggctaaaagataagaat
ttgcagaacagcctagccaaggagactctggagcccctctctcaggcagcctggctgctt
caggttaagaagaccacagacagtgatgccaaggagatctcccaatgttgcacttccctg
tctgctgtgcagatcataaagatccttaattcatacacacctatagacgacttcgagaaa
agagtcaatccctccttcgttcgcaaagtacaggctcttctgaataaccggggagactca
ttacagctgatgctggacaccaagtatgtttttcaagtcacatttcctttcaccgcctca
ccgcatgccctggagatgacccagatccccagcagcttcaagctcggctttctccggaga
ctgtag
DBGET
integrated database retrieval system
