KEGG   Arvicanthis niloticus (African grass rat): 117712734
Entry
117712734         CDS       T08817                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117712734 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:anu03041]
    117712734 (Sf3a1)
Spliceosome [BR:anu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117712734 (Sf3a1)
 Complex B
    117712734 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    117712734 (Sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 117712734
NCBI-ProteinID: XP_034364740
LinkDB
Position
7:complement(36545877..36566818)
AA seq 791 aa
MQAGPVQAVPPPPPVATESKQPVEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFAKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDQEKAEETPSQLDQDTQVQDMDEGSDDE
EEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPA
SKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEET
AIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTK
EKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRPPM
ASVVRLPPGSVIAPMPPIIHAPRINVVPMPPAAPPIMAPRPPPMIVPTAFVPAPPVAPVP
APAPMPPVHPPPPMEDEPPSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKL
NGQGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIH
LALKERGGRKK
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgcaggccggacccgtgcaggcggtacccccgccgccgccagtagccactgagtccaaa
cagccagttgaagaagaagcatcatcaaaggaggattccactccttccaagccagtggta
gggattatttaccctcctccagaggtcaggaatatcgtcgacaagactgccagttttgtg
gccagaaatgggcctgagtttgaagctaggattcgacagaatgagatcaacaaccccaag
ttcaatttcttaaatcccaatgacccttaccatgcctactaccgccataaggtcagcgag
ttcaaggaggggaaggctcaggaaccctcagctgccatccccaaggttatgcagcagcag
cagcaagccacacagcaacagctgccccagaaggtccaagcccaggtgatccaagagacc
atagtaccgaaggagccccctcctgagtttgagtttattgctgatcctccttccatctca
gccttcgacctggatgtagtgaagctgacagctcagtttgtggccaggaatgggcgccag
tttctgacccagctgatgcagaaagagcagcgcaactaccagtttgactttctccgaccc
cagcacagcctcttcaactacttcacaaagctggtggagcagtataccaagatcttgatt
ccacccaaaggcttatttgcaaagctcaagaaagaggctgaaaatccccgagaagttttg
gaccaggtttgttaccgagtagaatgggccaaatttcaggaacgtgagaggaagaaggaa
gaagaggagaaagagaaggagcgagtagcttatgctcagatcgactggcatgattttgtg
gtggtggagacagtggattttcaacccaatgagcaaggaaactttccacccccaacaact
ccggaggaactgggagctcggatcctcattcaagagcgctatgagaagtttggggaaagc
gaggaagtggagatggaggttgagtcagatgaagaagatcaagaaaaggctgaggagact
ccttcccagctggaccaagatactcaagtacaggacatggatgagggttcagatgatgaa
gaagaaggacagaaagtgcctccacccccagagacacccatgcctccacctctgcccccg
acaccagaccaagtcattgtgcgaaaggactatgatcccaaagcttccaagccccttcct
ccagctcccgctcctgatgagtatcttgtatcccccatcactggggagaagattcctgcc
agcaaaatgcaagaacacatgcgcattgggcttcttgacccccgctggctggagcagcgg
gaccgctccatccgagagaagcagagtgatgatgaggtttacgcaccaggtctggatatt
gagagcagcttaaagcagttggctgagcgacgtactgacatctttggggtagaagagaca
gccattggtaagaagattggtgaagaggagatccagaagccagaggaaaaggtgacttgg
gatggccattcaggcagcatggcccggacccagcaggctgcccaggccaacatcaccctc
caggagcagattgaggccatccataaggccaagggcttggtgccagaagatgacactaag
gagaagattggccctagcaagcccaatgaaatccctcagcagccaccgcctccatcttca
gccaccaatatccccagctcagcacctcccatcacatcagtgccccggccacctgcgatg
ccacctccagttcgtaccactgttgtatctgcagtacctgtcatgcctcggccacccatg
gcatctgtggtccggctgcccccaggctcagtgatcgcccctatgccacccatcatccat
gcacccaggatcaacgtggtacctatgcctcctgcagcacctcccatcatggcaccccgc
ccacctcccatgattgtgccaacagcctttgtgcctgccccacctgtggctccagtccca
gccccagctccaatgcctcccgtacaccccccacctcctatggaagatgagcctccatcc
aagaaactaaagactgaggacagcctcatgcctgaggaagagttcctgcgcaggaacaag
ggtccagtgtccatcaaagtgcaggtacccaacatgcaggataagacggaatggaagctg
aatggtcaggggctggtcttcactctcccactcacagaccaggtctctgtcatcaaagtg
aagattcatgaagccacgggcatgcctgcagggaaacagaaactacagtatgaaggcatc
ttcatcaaggattccaactccctggcttactacaacatggccagtggtgctgtcatccac
ttggccctcaaggagagaggcggcaggaagaagtag

DBGET integrated database retrieval system