Arvicanthis niloticus (African grass rat): 117712776
Help
Entry
117712776 CDS
T08817
Symbol
Msx1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117712776 (Msx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117712776 (Msx1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
117712776 (Msx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
117712776
NCBI-ProteinID:
XP_034364799
LinkDB
All DBs
Position
7:complement(42481619..42485586)
Genome browser
AA seq
303 aa
AA seq
DB search
MAPAAAMTSLPLGVKVEDSAFAKPAGGGSGQTPGAAAATATAMGTDEEGAKPKVPASLLP
FSVEALMADHRKPGAKESVLVASEGAQAAGGSVHHLGTRPGSLGAPDAPSSPRPLGHFSV
GGLLKLPEDALVKAESPEKLDRTPWMQSPRFSPPPARRLSPPACTLRKHKTNRKPRTPFT
TAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKM
AAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYSASGPFQRAALPVAPVGLYTAHVGYSMY
HLT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgctgctatgacttctttgccactcggtgtcaaagtggaggactccgcc
ttcgccaagcctgctgggggaggctctggccagacccccggggctgctgcggccaccgca
accgccatgggcacagatgaggagggggccaagcccaaagtgcccgcttcactcctgccc
ttcagcgtggaggccctcatggccgatcacaggaagcccggggccaaggagagcgtcctg
gtggcctccgaaggggctcaggcagcgggtggctcagtgcaccacttgggcacccggccc
gggtcgctgggcgccccggatgcgccctcctcgccgcggcctctcggccatttctcagtc
gggggactcctcaagctgccagaagatgctttggtgaaggccgagagccccgagaagcta
gatcggaccccgtggatgcagagtccccgcttctccccgcccccagccagacggctgagt
cccccggcctgcaccctacgcaagcacaagaccaaccgcaagcccaggacgcctttcacc
acggctcagctgctggctctggagcgcaagtttcgccagaagcagtacctgtctattgcc
gagcgcgccgagttctccagctcgctcagcctcaccgagacccaggtgaagatctggttc
cagaaccgccgtgccaaggccaagagactgcaggaggccgagctggagaagctgaagatg
gccgcgaagcccatgttgccgcctgccgccttcggcctctcctttccccttggcggccct
gcagcggtggctgcagctgcgggggcctcactctacagtgcctctggccctttccagcgc
gctgcgctgcctgtagcgcccgtgggactctacacagcccatgtaggctacagcatgtac
cacctgacatag
DBGET
integrated database retrieval system
