Arvicanthis niloticus (African grass rat): 117712780
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Entry
117712780 CDS
T08817
Symbol
Thoc5
Name
(RefSeq) THO complex subunit 5 isoform X1
KO
K13174
THO complex subunit 5
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117712780 (Thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
117712780 (Thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117712780 (Thoc5)
03041 Spliceosome [BR:
anu03041
]
117712780 (Thoc5)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117712780 (Thoc5)
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117712780 (Thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
117712780
NCBI-ProteinID:
XP_034364805
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All DBs
Position
7:complement(35825713..35858748)
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AA seq
695 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPTEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSKGSKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYSEAPPNISKAEITM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSSQPPRQDKTLSV
AIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSV
LLDLKCKDNSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGD
HGKKTPNPANQYQFDKVGILTLRDYVLELGHPYLWVQKLGGLHFPKEQPQHTVMADHSQS
ASHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVIIAHE
DYMELHFTKDIVEAGLAGDTNLYYLALIERGTAKLQAAVVLNPGYSSIPPVFRLCLNWKG
EKTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEG
PKEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatccagcaaaaaacggaaacccaaagtgatccgaagtgatggagcccca
actgaagggaaacggaaccgatctgacacagagcaggaaggcaaatactacagcgaggag
gctgaggttgacctgagggaccctggcagagactatgagttgtacaagtacacttgccag
gagctacaaaggctgatggccgagatccaggacttgaagagcaagggcagcaaggacgtg
gccattgaaattgaagaacgaaggattcagagctgtgtgcatttcatgactctaaagaag
cttaaccgattggcccacatcaggttaaagaaaggaagagatcagacccacgaggccaaa
cagaaagttgatgcctaccacctacagctacagaacctgctctacgaagtgatgcacctg
cagaaggagatcaccaaatgtctggagttcaagtcaaagcatgaagaaattgatctggtc
agtttagaggaattttattcagaggctccaccaaacatcagcaaggccgagatcaccatg
ggagaccctcaccaacagacattggcacgcttggactgggagctggaacaacggaaaagg
ctggcagagaagtaccgagaatgtctgtccaataaggagaagatcctgaaggagattgag
gtgaagaaggagtatctgagcagcctccagcctcgcctcaacagcatcatgcaggcttcc
ttgccagtgcaagaatacctgttcatgccgtttgaccaagcacacaagcagtatgagact
gccaggcacctgccgcctcccctctacgtgctgtttgtgcaggccactgcatatgggcag
gcctgtgctcatatgaaatcctcctcccagccccctagacaggataagacgttgtctgtg
gcgattgaaggcagtgtggatgaagccaaagctcttttcaagccccctgaagactcccaa
gatgatgaaagcgactcagatgctgaagaggagcagaccacgaagcggcgtcggcccact
ctcggggttcagttggatgacaagcgcaaggagatgctgaaaaggcacccactgtctgtc
ctactggatctgaagtgcaaagacaacagtgtgcttcatctgactttctactatctcatg
aacctcaacatcatgacagtgaaagccaaagtgacgactgccatggagctgatcaccccc
atcagtgcaggagacttattgtctcctgactccgtcttgagctgtttgtatccaggagat
catggaaagaaaactccaaatccagccaatcagtatcagtttgataaagttggcatcctg
actttgagagactatgtacttgagttaggtcacccctacttgtgggtgcagaagctgggt
ggtctccacttccccaaagagcagcctcagcacacagtgatggctgaccactcacagagc
gccagccacatggagaccaccatgaaactgctgaagaccagggtacagtcccgcctggct
ctccacaaacagttcgcatctctggaacatggcattgtgccagtcaccagcgattgccag
tacctcttccctgccaaggttgtttctcgcctggtaaagtgggtgataattgcccatgaa
gattacatggagctgcacttcactaaggacattgtagaggcaggactggctggggacacc
aatctctactacctggcgcttattgaaaggggaaccgctaaacttcaggctgctgtggta
ctgaaccctggctactcttccatcccacctgttttccgactctgtctaaactggaaaggg
gagaaaaccaacagcaatgacgacaatattcgggctatggagagtgaggtcaacgtgtgc
tataaggagctgtgtggccctcggcccagtcaccagctcttgaccaaccagttgcagagg
ctgtgtgtgctgctggacgtctatctagagactgagagccatgatgacagtgtagagggc
cccaaggaatttccccaggagaagatgtgcctgcggctttttaggggtccgagtaggatg
aagccatttaaatataaccatcctcagggattcttcagccaccgctga
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integrated database retrieval system
