Arvicanthis niloticus (African grass rat): 117712829
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Entry
117712829 CDS
T08817
Symbol
Pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu01521
EGFR tyrosine kinase inhibitor resistance
anu04010
MAPK signaling pathway
anu04014
Ras signaling pathway
anu04015
Rap1 signaling pathway
anu04020
Calcium signaling pathway
anu04072
Phospholipase D signaling pathway
anu04144
Endocytosis
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04540
Gap junction
anu04630
JAK-STAT signaling pathway
anu04810
Regulation of actin cytoskeleton
anu05163
Human cytomegalovirus infection
anu05200
Pathways in cancer
anu05206
MicroRNAs in cancer
anu05214
Glioma
anu05215
Prostate cancer
anu05218
Melanoma
anu05230
Central carbon metabolism in cancer
anu05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117712829 (Pdgfra)
04014 Ras signaling pathway
117712829 (Pdgfra)
04015 Rap1 signaling pathway
117712829 (Pdgfra)
04630 JAK-STAT signaling pathway
117712829 (Pdgfra)
04020 Calcium signaling pathway
117712829 (Pdgfra)
04072 Phospholipase D signaling pathway
117712829 (Pdgfra)
04151 PI3K-Akt signaling pathway
117712829 (Pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117712829 (Pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117712829 (Pdgfra)
04540 Gap junction
117712829 (Pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117712829 (Pdgfra)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117712829 (Pdgfra)
05206 MicroRNAs in cancer
117712829 (Pdgfra)
05230 Central carbon metabolism in cancer
117712829 (Pdgfra)
05231 Choline metabolism in cancer
117712829 (Pdgfra)
09162 Cancer: specific types
05214 Glioma
117712829 (Pdgfra)
05218 Melanoma
117712829 (Pdgfra)
05215 Prostate cancer
117712829 (Pdgfra)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
117712829 (Pdgfra)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
117712829 (Pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
anu01001
]
117712829 (Pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
anu04090
]
117712829 (Pdgfra)
Enzymes [BR:
anu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117712829 (Pdgfra)
Protein kinases [BR:
anu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117712829 (Pdgfra)
CD molecules [BR:
anu04090
]
Proteins
117712829 (Pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
C2-set_2
Ig_6
DUF3475
Kinase-like
Motif
Other DBs
NCBI-GeneID:
117712829
NCBI-ProteinID:
XP_034364888
LinkDB
All DBs
Position
7:75905937..75952912
Genome browser
AA seq
1089 aa
AA seq
DB search
MGTSHQAFLVLGCLFTGPSLIFCQLLLPSIFPNENEKIVQLNSSFSLRCSGESEVSWQHP
MSEEDDPNVEIRNEGNNSNLFVTVLEVVNASAAHTGWYTCYYNHTQTEESEIEGRHIYIY
VPDPDMAFVPLGMTDSLVIVEEDDSAIIPCRTTDPETQVTLHNNGRLVLASYDSRQGFNG
TFSVGPYVCEATVKGRTFKTGEFNVYALKATSELNLEMDTRQTVYKAGETIVVTCAVFNN
EVVDLQWSYPGEVRNKGITMLEEIKLPSIKLVYTLTVPKATVKDSGEYECAARQATKEVK
EMKRATISVHEKGFVEIKPTFGQLEAVNLHQVREFVVEVQAYPTPRISWLKDNLTLIENL
TEITTDVQKSQETRYQSKLKLIRAKEEDSGHYTIIVQNDDAVKSYTFELSTLVPASILEL
VDDHHGSGGGQTVRCTAEGTPLPDIEWMICKDIKKCNNDTSWTVLASNVSNIITEFHRRG
RSTVEGQVSFAKVEETIAVRCQARNNLSLVTRELKLVAPTLRSELTVAAAVLVLLVIVIV
SLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFMSRHPEKPKKDLDIFGLNPADESTRSY
VILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKN
LLSDDDSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATSEVYEIMVQCWNSEPEKRPSFYHLSEIVENLLPGQYKK
SYEKIHLDFLKSDHPAVARMRVDSDNAYIGVTYKNEEDKLKDWEGGLDEQRLSADSGYII
PLPDIDPVPEEEDLGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDS
SDLVEDSFL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggggacctcccaccaggcctttctggtcctcggctgtctcttcacagggccgagtctc
atcttctgccagctcctgttaccctctatcttcccaaacgagaatgagaagattgtgcag
ctgaattcatctttttctctgagatgctctggggagagtgaagtgagctggcagcacccc
atgtctgaagaagacgaccccaacgtggaaatcagaaacgaggggaacaacagtaacctc
tttgtcacggtgctggaagtggtcaacgcctcggcggcccacaccggatggtacacttgc
tactacaaccacacacagaccgaagagagtgagatcgaaggcaggcacatctacatctat
gtaccagacccagatatggcctttgtgcctctcgggatgacagattctttagtcatcgtg
gaagaggacgattctgccatcataccttgtcgcaccacagatccggagactcaagtaacc
ttgcacaataacgggaggctggtgcttgcctcctatgacagcagacagggcttcaatggg
accttcagtgtggggccttacgtctgtgaggccaccgtcaaagggaggacgttcaagacc
ggcgagtttaacgtttatgccttgaaagcaacgtcagagctgaatctggaaatggataca
cgccagactgtgtataaggcaggagaaacgatcgtggtgacctgtgccgtctttaacaat
gaggtggttgacctgcagtggagttaccctggagaagtgagaaacaaaggtatcaccatg
ctggaggagatcaaactcccgtccatcaaactggtgtacactttgaccgtccccaaggcc
acggtgaaggatagtggagagtatgaatgtgctgcccgtcaggccactaaagaggtcaag
gaaatgaagagagccaccatttctgtccacgagaaaggcttcgtcgagatcaagcccacc
tttggccagctggaagctgtcaacttgcatcaagtcagagagttcgtggtggaggtgcag
gcctacccgactcccaggatatcctggctgaaggacaacttgactctgattgagaatctc
accgagatcaccacggacgtacagaagagccaggagacaaggtatcaaagcaaattaaag
ctgatccgggctaaggaagaagacagcggccattacaccatcatagttcagaacgatgac
gcagtgaagagctacacgtttgagctgtcaactctagttcctgcatccattctggagctc
gtggatgaccaccatggctctggcgggggacagactgtgaggtgcacagctgaaggcacc
cctcttccggacatcgagtggatgatctgcaaggatattaagaaatgtaataatgacact
tcgtggacggttttggccagcaatgtctcgaatattatcacagagttccatcgccgaggt
aggagtaccgtggagggacaagtgtccttcgccaaagtggaagagaccatcgcagttcga
tgccaagcgaggaacaacctcagccttgtgacccgcgagctgaagctggtggctcccacc
ctgcgatctgaactcacggtggcggccgcggtgctggtgctgttggtgattgtcattgtc
tctctcattgtcctggttgtcatttggaagcagaaaccacggtatgaaattcgctggagg
gtcatcgagtcaatcagccccgatggacatgagtatatatatgtagaccccatgcagctg
ccttatgactccagatgggaattcccgagagatggactcgtgcttggtcggatcttgggg
tctggtgcatttgggaaagtggttgaaggcacagcgtatggattaagccggtcccagcct
gtaatgaaggtggctgtgaagatgctcaaacccacagccaggtctagcgagaagcaagct
ctcatgtccgagctgaagataatgacacacttgggaccacatttgaacattgtgaatttg
ctgggagcctgcaccaagtcaggccccatttacatcatcacagaatactgcttctatggg
gatttggtcaactatttgcataagaacagagatagcttcatgagccgacacccagagaag
ccaaagaaagacctggacatctttggattgaatcctgcagatgagagtacaagaagttat
gtgattttgtcttttgaaaataacggcgactacatggacatgaaacaagctgataccaca
cagtatgtccccatgcttgaaaggaaagaggtttctaaatactctgatatccagagatcg
ctgtatgatcggccggcctcctataagaagaaatccatgctagactcagaagtcaaaaac
ctcctttcagatgatgactccgagggtctgactttgctggatttattgagtttcacctat
caggttgcccgaggaatggagtttttggcttcgaaaaattgtgtccaccgggacctggct
gctcgcaacgtccttctggcacaagggaaaattgtgaagatctgtgactttgggctggcc
agagacatcatgcatgattccaactacgtgtcaaaaggcagtacttttctgcctgtgaag
tggatggcacccgagagtatcttcgacaacctctataccacactgagtgacgtctggtct
tatggcattctgctctgggaaatcttttcccttggtggcacaccctaccctggcatgatg
gttgattctactttctataacaagatcaagagtggataccgaatggccaaacctgaccat
gccaccagtgaagtctatgagattatggtgcagtgctggaacagtgagcctgagaagaga
ccttccttctaccacctcagcgagatagtggagaatctgctgcctggacaatacaagaag
agttatgaaaagattcacctggacttcctaaagagtgaccatccggctgtggcacgcatg
cgcgtggactcagataatgcgtacattggtgtcacttacaaaaatgaagaggacaagctg
aaggactgggaaggtggcctggatgaacagagactgagtgcagacagtggctacatcatt
cccctgccagacattgaccctgttcccgaggaggaagacctgggcaagaggaacagacac
agctcgcagacttcggaagagagtgccatcgagacaggttccagtagttccaccttcatc
aagagagaggacgagaccatcgaggacatcgacatgatggatgacattggtatagattcc
tcggacctggtggaggacagtttcctgtaa
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