Arvicanthis niloticus (African grass rat): 117712833
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Entry
117712833 CDS
T08817
Symbol
Fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117712833 (Fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117712833 (Fip1l1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117712833 (Fip1l1)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117712833
NCBI-ProteinID:
XP_034364896
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Position
7:75290746..75349724
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AA seq
604 aa
AA seq
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MSAGEVERLVELSGGTGGDEEEEWLYGGPWDVHVHSDLTKDLDENEVERPEEENASANPP
SGIEEEAAENGVAKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLN
IKAGGRVYGNTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFN
EDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGTFNLFKVQQGRT
GNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKASSSVGKWQDRFGR
AESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSDRSATEVDNNFSKPPPFFP
PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGH
SSGYDSRSARAFPYGNVAFPHLTSSAPSWPSLVDTTKQWDYYARREKDRDRDRDRERDRE
RERDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRE
RRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPVPEQESAEA
TPAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccggcgaggtggagcgcctggtggagctgagcggcgggaccggaggggatgag
gaggaagagtggctgtatggcggcccgtgggacgtgcatgtgcacagtgatttgacaaag
gatctagatgagaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcctcca
tctgggatcgaagaggaagctgctgaaaatggtgtggcgaaaccgaaagtgactgagact
gaagacgacagtgatagtgacagtgacgatgatgaagatgatgttcacgtcactatagga
gacatcaaaacgggagcgccacagtatgggagttatggaacagcaccagtaaatcttaac
atcaaggcagggggaagagtttatggaaatacaggaaccaaagtcaaaggagtggacctt
gatgcacctggcagcattaatggagttccactgttggaagtagatttggattcttttgaa
gataagccatggcggaaacctggtgctgatctttctgattattttaattatggctttaat
gaagatacttggaaagcttactgtgaaaaacaaaagagaattcgaatgggactggaagtt
atacctgttacttcaacgacaaacaagattacggccgaagactgtactatggaagttaca
ccaggtgcagagatccaagatggcacattcaatctttttaaggtacagcaagggagaact
ggaaattcagagaaagaagcagcacttccatctacaaaagctgagtttacgtctccacca
tcactgttcaagactggtctgccaccaagcagaaacagcacctcttctcagtctcagaca
agtactgcctccagaaaagccagttcaagcgttgggaagtggcaggatcgatttgggagg
gccgagtcacctgatctaaggagattacctggagcaattgatgtcattggtcagacaata
accatcagccgagtagaaggaagacggcgtgcaaatgagaacagcaacatacaggttctt
tctgacagatctgccaccgaagtagacaacaatttcagcaaaccacctccatttttccct
ccaggggctcctcctactcacctccctcctcctccatttcttccacctcctccaactgtc
agcactgctccacctctgattccacctccaggtattccaataactgtaccacctccaggt
ttcccccctccaccaggcgctcctcctccatctcttataccgacaatagaaagtggccat
tcctctgggtacgacagccgttctgcacgagcatttccctatggcaatgttgcctttccc
caccttaccagttccgctccttcatggcctagccttgtggacaccaccaagcagtgggac
tattatgcacggagagaaaaagatcgagatcgagaccgagacagagagcgagacagagag
cgagagcgagaccgggacagggaacgggagcgcacgcgggagcgagagcgggagcgggac
cacagccccaccccaagtgtcttcaacagtgatgaagaacgatacagatacagggagtat
gcagagagaggctatgagcgccatagagctagtcgggagaaagaagagcggcaccgagaa
cgacggcacagagagaaggaggaaacaagacacaagtcctcccgcagtaatagtagacgc
cgtcatgaaagtgaagaaggggacagccacagaagacacaaacacaaaaagtctaaaaga
agcaaagaaggaaaagaggctggcagcgagcctgttcccgaacaggagagcgccgaagcc
acacctgctgagtag
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