KEGG   Arvicanthis niloticus (African grass rat): 117712871
Entry
117712871         CDS       T08817                                 
Symbol
Shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2 isoform X1
  KO
K19613  leucine-rich repeat protein SHOC2
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04014  Ras signaling pathway
anu04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    117712871 (Shoc2)
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    117712871 (Shoc2)
SSDB
Motif
Pfam: LRR_8 LRR_14 LRR_4 LRR_1 LRR_LRWD1 LRR_9 LRR_At5g56370 LRR_5 LRR_13 LRR_NLRC4
Other DBs
NCBI-GeneID: 117712871
NCBI-ProteinID: XP_034364974
LinkDB
Position
1:159993745..160075423
AA seq 582 aa
MSSSLGKDKDSKEKEPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKESSAA
QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREESSMRLDLSKRSIHILPPSVK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITTVEKDIRNLPKLSMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIP
RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgagtagtagtttaggaaaagacaaagactctaaagagaaagagcccaaagtgccgtct
gccaaggaacgagaaaaagaggcaaaagcctctggaggttttgggaaagaaagcaaagag
aaagaacctaaaaccaaaggaaaagatgccaaagatggaaagaaggagtccagtgctgcc
caaccaggtgtggctttttcagttgacaataccatcaaacggccaaatccagcaccggga
actagaaaaaaatccagcaatgccgaggtaattaaggagcttaacaaatgccgggaggag
agctcaatgcgcttggacttatccaagaggtctatacatatactgccaccatcagtcaaa
gagttgactcaactcacagaactttatttatacagtaacaaattgcagtccctcccagca
gaggtgggctgtctagtcaatctcatgacgttggctctcagtgagaattcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcggatgcttgatttacggcataataaa
ctgagagaaattccttccgtggtatataggctagactctctcactactctctatcttcgc
tttaaccgcatcacgactgtggaaaaggacatccgaaacctgccgaagctcagcatgctc
agcatccgagagaacaagatcaagcagctccctgctgagattggtgaattatgtaacctc
attaccctggatgtagctcacaatcaacttgaacaccttccaaaggagattggaaactgc
acacagataaccaaccttgacttgcagcacaatgaactactagacctcccagatacaata
ggaaacctgtccagtttaaatcgccttggcctgagatacaatagattgtcagcaataccc
agatcattagcaaaatgcagtgcacttgaggagttaaatttagagaacaataacatttct
actctaccagagagtcttttgtccagtcttgtaaaattgaatagtttgaccttagctaga
aattgcttccagttatatccagtgggaggtccgtctcagttttccaccatttattccctc
aacatggaacacaatcgaatcaacaaaatcccatttggaattttttccagagctaaagtg
ttaagtaagctgaatatgaaggacaatcagttaacatcacttcctttggattttggaact
tggaccagtatggtagaattgaatttagcaactaatcagctcacaaagatcccagaggat
gtatctggtctggtttctcttgaggttctaatattatcgaacaatcttctaaagaagctt
ccccacggtttgggaaaccttaggaagttacgagagttagacctggaggagaacaagctg
gagtccttgcccaatgagatcgcttaccttaaggatttgcagaaattagtcttgacaaac
aaccagttgaccactcttcccagaggcatcggtcaccttaccaacctcacgcaccttggt
cttggagagaacctgctcactcaccttcctgaggaaattggtacactggaaaacctagaa
gaactgtatttgaatgacaaccccaaccttcacagcctcccctttgagcttgctctttgc
agcaagttgtcaatcatgagtattgagaactgtccactcagtcacctcccacctcaaatt
gttgctggagggccttcgttcattattcagttcttaaagatgcagggtccgtatcgtgcc
atggtctga

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