Arvicanthis niloticus (African grass rat): 117712883
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Entry
117712883 CDS
T08817
Symbol
Ykt6
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04130
SNARE interactions in vesicular transport
anu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117712883 (Ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117712883 (Ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117712883 (Ykt6)
Membrane trafficking [BR:
anu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
117712883 (Ykt6)
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
117712883
NCBI-ProteinID:
XP_034364994
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Position
7:complement(34789345..34801089)
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AA seq
198 aa
AA seq
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MKLYSLSVLYKGEPKAVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKGSRASVK
EQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIQY
TALDGHLSRYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCAIM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagcctcagtgtcctttacaaaggcgaaccaaaagcggtgctgctcaaa
gccgcgtacgatgtgtcttcttttagtttcttccagaggtccagtgttcaggaattcatg
acctttacaagtcaactgattgtggaacgctcagcgaaaggcagcagagcttctgtcaaa
gaacaagagtatctttgccatgtctacgtccggagcgacagtctggcaggtgtggtcatt
gctgacagcgaatacccttccagagtggccttcaccttgctggagaaggtactagatgaa
ttctccaagcaggtcgatagaatagactggccagtagggtcccctgccacaatccagtac
acagccttggatggtcaccttagtagataccagaacccccgagaagctgatcccatgagt
aaagtacaggccgaactggatgagaccaaaatcattctgcacaacactatggagtctttg
ttagagcgaggcgagaagcttgatgacttggtatccaaatcagaagtactgggaacacag
tcgaaagccttctataaaactgcccggaaacaaaactcatgctgtgcaatcatgtga
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