Arvicanthis niloticus (African grass rat): 117712993
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Entry
117712993 CDS
T08817
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117712993 (Myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117712993 (Myo5a)
04131 Membrane trafficking [BR:
anu04131
]
117712993 (Myo5a)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117712993 (Myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117712993 (Myo5a)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117712993 (Myo5a)
mRNA cycle factors
P-body specific factors
117712993 (Myo5a)
Membrane trafficking [BR:
anu04131
]
Others
Actin-binding proteins
Myosins
117712993 (Myo5a)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117712993 (Myo5a)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117712993 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Csm1_N
AAA_16
AAA_22
Myosin_N
NPHP3_N
nSTAND3
DUF5382
Motif
Other DBs
NCBI-GeneID:
117712993
NCBI-ProteinID:
XP_034365142
LinkDB
All DBs
Position
7:8370254..8523185
Genome browser
AA seq
1852 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYRLDPKTNELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGNADSFHYTKQGGSPMIEGVD
DAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVGFASRDSDSCTIPPKHEPLIVF
CDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFNWIVDHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PSSATSSGRTPLTRVPVKPTKGRPGQTAKEHKKTVGLQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVHRRYKTRRAA
TIVLQSYLRGYLARNRYRKILREHKAVIIQKCVRGWLARTHYKRTMKAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEAAYNSE
TEKLRNDVERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKSIEERADKYKQET
DQLVSNLKEENSLLKQEKETLNHLIVEQAKEMTETMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMLNVPKPGHKRTDSTHSSNESEYTFSSEFAETEDIAPRT
EEPTEKKVPLDMSLFLKLQKRVTELEQEKQLMQDELDRKEEQVLRSKAKEEERPQIRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRSST
MDYQELNEDGELWLVYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQ
LLAQNLQLPPEARIEASLQHEITRLTNENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGEL
EVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLEYKREDEQKLVKNLILELKPRGVAVN
LIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTINSIKKVLKKRGDDFETVSFWLSNTCR
FLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLESILQP
MIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLNSFHSVMCQHGMDPE
LIKQVVKQMFYIVGAITLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKET
LEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQIVKVLNLYTPVNEFEERVSVSFIRT
IQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLALETIQIPASLGLGFIARV
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtccgagctctacaccaagtttgccagggtttggatacctgatcctgaggaa
gtgtggaaatctgcagagttgctcaaggattataagcctggagataaagtgctcctgctt
caccttgaggaagggaaggatttggaataccgtctggatccaaagaccaatgagctccct
cacttacggaaccctgacatacttgttggagaaaatgacctcacagctctcagctatctt
catgagcccgctgtgctacataatctccgagttcgtttcatcgactccaaacttatttac
acgtattgtggaatagtcctagtagctataaatccctatgaacagctgcctatttatgga
gaagatattattaacgcctacagcggccagaacatgggtgacatggatcctcacatcttt
gcagtagctgaggaggcttacaagcaaatggcaagggatgaacgaaatcagtccatcatt
gtaagtggagagtcaggtgcagggaagacggtctcagctaaatatgccatgcggtacttt
gcaaccgtaagtggctctgccagtgaggccaatgttgaagaaaaggtcttggcctccaac
cccatcatggagtcaattggaaatgccaaaacaaccaggaatgataatagcagccggttt
ggaaaatacattgaaattggttttgacaagagatatcgaatcatcggtgccaatatgaga
acttaccttttagagaaatccagagtggtgttccaggcagaagaagagagaaactaccat
atcttctatcagctctgtgcttcggcaaagttacctgaatttaagatgctgcggttagga
aatgcagatagttttcattacacgaagcaaggaggcagccctatgatagaaggagtggat
gatgcaaaggagatggcgcacaccaggcaggcctgcactctgctgggaattagtgaatct
taccaaatgggaatttttcgaatacttgctggcattcttcacttaggcaatgttggattt
gcatctcgagattcagacagctgcacaatacctcctaagcatgagcctcttatcgtcttc
tgtgacctcatgggtgtggattatgaagagatgtgtcactggctttgccaccgaaagctg
gctactgccacagagacatacatcaagcccatctccaagctgcaggccacaaatgcccga
gatgctttagccaagcacatctatgctaagctcttcaactggattgttgatcacgtcaat
caggctctccattcggctgtcaaacagcactctttcattggcgtgctggacatttacgga
tttgaaacctttgaaataaatagttttgaacagttctgcataaattatgcaaatgaaaaa
ctacagcaacaattcaacatgcatgtcttcaaattggaacaggaggaatatatgaaggag
caaattccatggacactcatagatttctatgataatcagccttgtatcaatcttatagaa
tctaaactgggcattctagatttgctggatgaggaatgtaagatgcctaaaggaacagat
gacacatgggcccaaaaactgtacaacacacatttgaacaaatgtgccctctttgagaag
ccccgcatgtcaaataaagctttcatcatcaaacattttgctgacaaagtagaataccag
tgtgaaggttttcttgaaaagaataaagacaccgtttttgaagaacaaattaaagtcctt
aagtcaagcaagtttaagatgctaccagaactatttcaagatgatgagaaggccatcagt
cccagctctgccacctcctcagggcgcactcctctcactcgggttcctgtaaagcccacc
aagggccgacctggccagactgccaaagagcacaagaagacagtgggacttcagtttcga
aactcccttcacctgcttatggaaacccttaacgccaccactcctcactatgtacgctgt
attaagcctaatgatttcaagtttccattcacatttgatgagaagagggcagtgcagcag
ctaagagcatgtggtgtcctggagaccatccggatcagcgcagcagggtttccctcacgg
tggacttatcaagagtttttcagccggtaccgggtcctaatgaagcaaaaagatgtgctg
ggagatagaaagcaaacatgcaagaatgtattagagaaactgatattggacaaggataaa
taccagtttggtaagacaaagatcttttttcgtgctggtcaagtggcctatctagaaaaa
ttgagggctgacaaactgagggctgcctgcatccggatccagaagaccattcgtgggtgg
ctgctaaggaagagatacctgtgcatgcagagggcagccatcacagtgcagcgatacgtg
cggggctatcaggctcgatgctatgctaagtttctgcgcagaaccaaggcagcaaccacc
attcaaaagtactggcggatgtatgtggtccacaggaggtacaagactagacgagctgcc
acaattgttcttcagtcttacttgagaggctacttggcaagaaataggtatcgcaagata
ctccgtgagcacaaagcagtcatcattcagaaatgtgtccgtggctggctggctcgtaca
cattataagaggaccatgaaagccatcatctaccttcagtgctgtttccggcggatgatg
gccaagcgtgagctgaagaaactcaaaattgaggctcgctctgtggaacgctacaagaag
ctccatattggcatggaaaacaagattatgcagctgcagcgcaaagtggatgagcagaat
aaagactacaaatgcctcatggagaaactgaccaatctggaagcagcatacaactctgag
actgaaaaactacgaaatgatgtagaacgtcttcagctaagcgaggaggaagctaaggtt
gccactgggcgggtccttagtctgcaggaagaaattgcaaaactccgaaaagacctggaa
caaactcgatcagagaaaaagtccattgaagaacgagcagataaatacaaacaagaaact
gatcagctggtgtcaaacttgaaggaagaaaacagtttgctgaagcaggaaaaggagacc
ctcaatcacctcattgtggagcaggctaaggagatgacagaaactatggagaagaagtta
gtagaagagacaaaacaactggagcttgacctgaatgatgagaggctgaggtaccagaac
cttctgaatgagttcagtcgtctggaggagcgctatgatgacctcaaggaagagatgacc
ctgatgctgaatgtgcctaagccaggacacaagagaacagactctacccacagcagtaat
gagtccgaatacacatttagctctgaatttgcagaaactgaagacattgcaccaaggaca
gaggagccaactgagaagaaggtgcctctggatatgtcattgttccttaagctccagaag
cgtgtcacagagctggagcaggagaagcagctgatgcaggatgagctggaccgaaaggag
gagcaggtgctccgtagcaaggcaaaggaagaagaaagaccacagattagaggtgctgag
ctggaatatgagtccctcaagcgtcaagaactggagtcagaaaacaaaaaactgaaaaat
gagctgaatgagttacgcaaagcgctcagtgaaaaaagtgccccagaagtgactgcacca
ggtgcacctgcttaccgtgtcctcatggaacagctgacctccgtgagcgaggagcttgat
gtccgaaaggaggaagtcctcatcttgaggtctcagttggtgagccagaaggaagctatc
caacccaagaatacaatgacagattccacaatacttttggaagatgtacagaaaatgaaa
gacaaaggtgaaatagcacaagcatatattggtttgaaagaaacaaacagatcatctact
atggattaccaggagttgaatgaggatggagagctctggctggtttatgaagggttaaaa
caagccaacaggctcctagaatcccagctacagtcacagaagaggagccatgagaatgag
gctgaggccctccgtggggagatccagagcctaaaggaagaaaacaaccggcaacagcag
ctgctggcccagaacctacagctgcccccggaggcccgcattgaggccagcctgcagcat
gagatcacccggctgaccaatgaaaacctggatctgatggaacaacttgaaaagcaggat
aaaactgtccggaaactgaagaaacaactgaaagtctttgccaaaaaaatcggtgaacta
gaagtgggacagatggagaacatatctccgggacagatcatcgatgagcctatccggcca
gtcaacattccccggaaagaaaaggatttccaaggaatgctggagtacaagcgggaggat
gagcagaagctcgttaagaacctgattctagaactaaagccacgtggtgtggctgtcaat
ctgattccaggcttaccagcatatatcttgtttatgtgtgtgcgtcatgccgactacctg
aacgatgatcagaaagtaaggtcattgctgacatcaacaattaacagcatcaaaaaagtc
ttgaagaaaagaggtgacgattttgaaactgtctccttctggctctctaacacatgtcgg
tttttgcactgtttgaagcaatatagtggagaagagggcttcatgaaacacaacacgtct
cgacagaatgaacactgcctcaccaatttcgacctcgctgagtatcggcaagtactgagc
gacttggccattcagatctatcaacagcttgtgagggtcttagagagcatcctccagccc
atgatagtctcaggcatgctagagcatgaaacaattcagggtgtatctggggtgaagccc
acggggctcagaaaacgaacctccagtatcgcagacgagggcacctacacactggactcc
atcctgcggcagctcaactccttccattcagtcatgtgtcagcatggcatggacccggag
ctaatcaagcaggtggttaagcagatgttctacattgtgggtgccatcaccctaaacaac
ctcctgctgcgtaaggacatgtgctcctggagcaaaggcatgcagatcaggtacaatgtc
agtcaattggaagaatggctacgtgacaagaatctaatgaacagtggggccaaggaaact
ctggaacctcttatccaggccgctcagcttttgcaagtgaaaaagaaaactgatgatgac
gcagaagccatctgctccatgtgcaacgccctgaccacggcccagatcgtcaaagtgctg
aatctgtacacacccgttaatgagtttgaagaaagggtctctgtttcgtttatccgtact
atacagatgcggttacgagacaggaaagactctccgcagctgcttatggatgcaaaacac
atctttcctgtcactttcccctttaacccgtcctccctggccctagaaaccatccagatc
ccagccagcctgggcctgggcttcattgcacgggtctga
DBGET
integrated database retrieval system
