Arvicanthis niloticus (African grass rat): 117713184
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Entry
117713184 CDS
T08817
Symbol
Otx1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
117713184 (Otx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117713184 (Otx1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117713184 (Otx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
117713184
NCBI-ProteinID:
XP_034365419
LinkDB
All DBs
Position
7:20874826..20881783
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AA seq
355 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGNGTKSRPVKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAAGGLGGNPVAAASSLSTPTASSIWSPA
SISPGSAPASVSVPEPLGAPSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPSS
SYFGGVDCSSYLTPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPTAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatacggcatgaacgggctgggcctagctggccct
gccatggacctcctgcatccctccgtgggctatcctgccactccgaggaagcagcgacgg
gagcgcaccaccttcacgcgctcgcagctggacgtgcttgaggcgctgttcgcaaagact
cgctacccagacatcttcatgcgcgaggaggtggcgctcaagatcaacctgccagagtcc
agagtccaggtttggttcaagaaccgccgcgccaagtgccgccagcagcagcagagcggg
aatggcacgaaaagccggccggtcaagaagaagtcatctccagtgcgcgagagctcgggt
tccgagagcagcggccagttcacaccgcccgccgtgtctagctctgcttcttcgtctagc
tcagcgtccagtgcctccgccaacccggcggctgctgcggccgggggcctgggtgggaac
ccggtggcagccgcgtcctctctgagcacgcctactgcttcgtccatctggagcccggcc
tccatctcgccgggctctgcgccggcatccgtatcagtgccagagccactgggcgccccg
agcaacgcctcgtgcatgcagcgctcggtagccgcaggtgcggccactgccgcggcctcc
taccctatgtcctatggccagggcggaagctatggccagggctaccccgcgccctcctct
tcttactttggcggtgtagactgcagctcctacctaacgcccatgcactctcatcaccac
ccgcaccagcttagccccatggcaccctcttccatggctggccatcaccaccaccacccg
cacgcgcaccacccactaagccagtcttcaggccaccatcaccaccatcaccaccaccac
caccaccaaggttatggaggctctgggctcgccttcaactctgccgactgcttggattac
aaggagcccaccgctgctgctgcttcctctgcctggaaactcaacttcaactctcccgac
tgtctggactataaggaccaagcctcgtggcggttccaagtcttgtga
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