Arvicanthis niloticus (African grass rat): 117713553
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Entry
117713553 CDS
T08817
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117713553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117713553
Transporters [BR:
anu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117713553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
ABC2_membrane
AAA_30
RsgA_GTPase
AAA_15
AAA_6
SRP54
DUF2110
Motif
Other DBs
NCBI-GeneID:
117713553
NCBI-ProteinID:
XP_034365691
LinkDB
All DBs
Position
1:87776057..87934723
Genome browser
AA seq
1678 aa
AA seq
DB search
MNQLIVNQLTVLLWKNFTLKKRQTISTITEVLAALLFVIMLLIFRALTGMNVAGPYNFTP
QPIATMPSFIKDAKEWELIYIPSDIDVVSEIIEDVKRNLNSTIKVRGFPSEAEFENYILF
DYMSQRVLAAIVFDCGFKNKNDPLPLQVKYHLRFVGAQRTVWWPDKIGWKTRLLFPNHPS
IQPRNPNFLDGGSPGYIKEGFLAVQYALDKSIMLYHESSAGEKLFDEIKILIQRFPYPSH
PQDKLLWISSPFIPLMFILMFSSIVLSIMRSIVFEKEKRLKEYQLIMGLRNWIIWIGYFF
TFFPLYVIIILLICILLFIVEEPILRYSDCSFIFVFLTCYAIASICFAFMVSTFFSKTRL
AASAGNLLFFASFFPYNFISEYYGMLDLTTKITACLSANVALALGINILIKLEIQEIGVK
WHNLWTPANLEDNLNFGYMLGMLLFDAFLYSLVTWYVEAVFPGQCGVAQPWYFFLMRSYW
FGKPNIRKTTEETKCYPVVHNCYEAEPINLEAGIQIKHLHKEFKNKPAVNNLSLNVYEGQ
VTVLLGHNGAGKTTTLSVLTGVYSSASRVKAYINGYNISDNMIEIRKNLGFCPQHDLLFD
DLTLSEHLFFYCMVKGIPQNIHCMEIDRMLSAFNMQENYHTLSGLVSGGVRRKLSIILAL
MGGSKVVILDEPSSGMDPVSRRATWDILQHYKQNRTILLTTHYMDEVDVLGDRIAIMVRG
TLHCCGSSVFLKQIYGAGYHIVLEKEPYCDVDNIIAMIQQHIPGAKLENDIGNELSFILP
KKYVSRFETLFTELEMRQKTLGIANFGASITTMQEVFLKVNKLAAPQRSIQTMQPYYLTY
KKMRQDEQQNVNMLRNYSKPNFPYLSEIATVKFNTGVPLYRQQFYSMFIKRALFISRNWK
LMFLQIVVVLVVTTYLLLALHLDNDDIPERELNLSDYGRTIVPYSVSGNSDLALKLIKNL
KIFLKSKNQSLKKIKGDMNDYILENKDCRTFCIIALSIKVERNKTVITIYFNNEAYHSPP
ISLSILDSILFMVLSGPNASITVFNKPQPLPRYGSNKVPVNGLQIVQCLAFGISVVVGSF
SIQTVTERISQAKHIQLLSGVCVYTYWLSALLCDLIIFFIACCVLLGIFKFCQLEAFVVH
YNFLDTILIFMLYGWCVVPLIYLGSFLFNSSTAAYIKLTLFNYFSTMFSIIIYTILQFYG
NDFPHLVHILIRTILMILPSYNLAMSISKYFDDYEVKRLCAREFRSIYVDCSDPYTKNNV
YGFGEHGIGKFLLTLATMGLIFLLLLLSLESFSCSLKSFVFRNIIFYFYNKFTKGRHGVV
SKQRAKEDEDEDIRKEKRKVFTLLLRLQNTPLVLNEVTKIYFKCPVVKAVKNISLVVRKS
ECFGLLGLNGAGKTTTFKMLTGEQTITSGIAFIDGNSVTKNPRKIRSRIGYCPQSESVLN
HMTGRESLVMYARLWGVPEQDINEYVEAFLHSVHLEPIADQFIHTYSAGSKRRLSTAIAL
MGKSSIVFLDEPSTGMDPVAQHLLWDTVACVCKTGKAIVITSHRMEECEALCSRLAIMVK
GRFTCLGTPQHVRKRFGHVYTLTVKINIAKDEDKVQEFKNFIKVTFPGNIKYQEFHGTIG
YYIPSKEICWGKVFEILEEAKVLFKLEDYSVKQVTLEQIFLTFANTDKMKTYQEIKLQ
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttgatagtcaatcaattaacagttctcctctggaaaaattttacattaaag
aagaggcagaccattagtacaattacagaagtcttggcagcattgttgtttgtaataatg
ttgttgatattccgtgcacttactggtatgaatgttgctggaccgtataatttcactcct
caacccattgctaccatgccttctttcatcaaagatgctaaggagtgggaattgatttac
ataccttctgatattgatgtggtatcagaaatcattgaagatgtaaagaggaatctcaac
tccactataaaagttcgaggttttccttcagaagctgagtttgagaattacattctgttt
gattatatgtctcagagagtactggctgccattgtttttgactgtggcttcaaaaacaaa
aatgatcctctgccacttcaggtaaaatatcacttgcggtttgttggtgcacagaggacc
gtctggtggccagacaagataggctggaaaacaagacttctctttcctaatcatccttct
atacaacccaggaatccaaattttcttgatggaggaagtcctgggtatatcaaagaagga
ttcctggcagtgcagtatgccttggacaagagcatcatgctgtatcatgaaagcagtgct
ggggaaaagctgtttgatgaaattaaaattctgatacagaggtttccatacccaagtcat
cctcaagataaactactttggatctccagtcctttcatcccactaatgttcatactcatg
ttctcttccattgtcctttccatcatgcgatctattgtgtttgaaaaggaaaaaagatta
aaggagtaccagctcataatggggcttagaaattggatcatctggattggctatttcttc
acgttcttccccttatatgtcatcattattcttttaatatgtatattgctctttattgta
gaagagccaatcttgcgctacagtgactgtagtttcatctttgtctttcttacatgttat
gccatcgcatccatatgctttgcctttatggttagcacgttcttcagtaaaactcgtttg
gctgcttctgctggaaacctcctattttttgccagtttctttccctataacttcatttct
gagtactatgggatgttggaccttactaccaagataactgcctgtttgagtgcaaatgtt
gctttggcactggggattaatattttaatcaagttggaaatacaggagattggtgttaaa
tggcacaacctttggacaccagccaatcttgaggataacctcaactttggctatatgctt
ggaatgcttttgtttgatgctttcttatacagccttgttacctggtatgtggaagctgtc
tttcctggacagtgcggtgtggctcaaccatggtactttttccttatgcgctcatattgg
tttggcaaaccaaatattagaaagactacagaagagacaaagtgctaccccgtagtacat
aactgttatgaggctgaacctatcaacttggaggcaggaatccagatcaagcatttgcac
aaggaatttaaaaataaacctgcagtaaacaacttgtcactaaacgtatatgaggggcag
gtcactgttcttctgggacacaatggagcaggaaagaccacaaccttgtctgttctcaca
ggtgtgtattcatctgcatccagggtaaaggcctatattaatggatataatatttcagat
aacatgattgaaattagaaaaaacttgggcttctgccctcaacacgacctattgtttgat
gatttgacactatcagaacacctttttttctactgtatggtaaaaggaatccctcaaaac
atacactgtatggaaattgaccgtatgctgtctgcttttaacatgcaagaaaactaccat
acattatcaggcttagtgagtggaggagtgaggcgcaaactctccatcatcttagcactt
atggggggctccaaggtagtgatacttgatgaaccatcatctggcatggacccagtgtca
agaagagccacctgggatatccttcagcattataaacagaatcggaccattttactaacc
acacactacatggatgaagttgacgtcctgggtgaccgcattgccatcatggtcaggggg
accttgcactgctgtggctcttcagtcttcctgaaacaaatatatggtgctggatatcac
atagtcttggagaaggaaccatattgtgacgttgataatatcattgcaatgattcagcag
catattccaggtgctaagttggaaaatgatataggaaatgaattatcatttatcttaccc
aaaaagtatgtatcaagatttgaaactttgtttacagagttggaaatgagacagaaaaca
ctaggcattgccaactttggagcttcaatcactacaatgcaagaagttttccttaaggtc
aataagctggcagctccccaaaggagtattcagactatgcaaccctattacttgacatac
aaaaagatgagacaagatgagcagcagaatgtgaatatgctcagaaattacagcaaacca
aattttccctatttgagtgaaattgctactgttaaatttaacactggggttccactttac
cgccaacaattttattccatgtttataaaaagagcactattcattagccgcaactggaaa
ttgatgtttttacagatagtggtagttctggttgtcactacatatctcttgttagctctg
catttagacaatgatgatatacctgaaagggagctgaatctgagtgactatggtagaacc
attgtaccttactcagtttcagggaattctgacttggctctgaagcttataaaaaacctg
aagatttttctaaagtcaaagaatcaaagcttaaaaaaaataaaaggtgatatgaatgat
tacatattagaaaataaagattgtcgtaccttctgcattattgcactttctattaaagtt
gagagaaacaaaacagtgatcactatttacttcaataatgaagcataccactcacctcca
atatccctgtcaatattagacagcattctttttatggtactttctggtcctaatgcttcc
attactgtcttcaataagcctcaacctctccctcgttatggttcgaacaaagtgcctgta
aatggattacaaatagtgcaatgtttagcttttggcatttctgtggtggtcgggtctttt
agtatccagacagtgactgaaagaatcagtcaagccaagcatatccagttactgtctggg
gtctgtgtgtatacttactggctctctgccttgttgtgtgacctcatcatcttcttcatt
gcctgctgtgtattactgggcatattcaaattctgccagctggaggcatttgttgtgcat
tacaacttcctggacacaattctgatctttatgctctatggttggtgtgttgttcctctc
atttatcttgggagctttctgttcaatagcagcactgctgcctacatcaaactgacgctg
tttaactacttttcaactatgttcagtatcatcatttacacgatcctgcaattttatggt
aatgactttcctcaccttgtccacatcctcataaggacaattttaatgatactgcctagt
tacaatctagcaatgagtatcagcaagtattttgatgactatgaggtgaaaagactgtgt
gctagggaattcagaagcatttatgtggattgcagtgacccatacacaaagaacaacgtg
tatggttttggagagcatgggattgggaagtttctgctcacactggctaccatgggcttg
atttttctcctcttgcttttatccctggagtccttttcctgtagtctgaagagctttgtc
tttcgaaacattattttttatttctacaataagttcacaaaaggcagacatggtgtagta
tctaagcagagagccaaagaagatgaggatgaagacataagaaaagaaaagagaaaagtc
tttacgctactgctcaggttacagaacaccccattggtccttaatgaagttacaaagatt
tattttaagtgtcctgttgtcaaggctgtgaaaaatatctcccttgtagtcaggaagtcg
gagtgctttggattgcttggattaaacggagctggaaaaactacgacattcaaaatgctg
actggagaacagactatcacctctggaattgcatttattgatggcaatagtgtcactaaa
aacccaagaaagattaggtcaagaattggttactgtcctcagtctgaatctgtgctgaac
cacatgacaggccgggaatcgttggtcatgtacgctaggttgtggggggtcccagagcaa
gacattaatgagtatgtggaagcctttctgcattcagtgcacctggaacccattgctgac
cagtttatccacacgtacagtgctggaagcaaacgtaggctaagcactgctatcgcccta
atgggaaagtcttcaattgtcttcctggatgaaccgtctactggcatggacccagtagct
caacatctactctgggacactgttgcatgtgtctgtaagactggtaaagctatcgtcata
acttcccacagaatggaagaatgtgaggccctctgttctaggctggccatcatggtgaaa
gggaggtttacatgcctaggcaccccccagcacgtcagaaagaggtttggtcatgtatac
actctaacagtaaagatcaatattgctaaggatgaagataaagtacaagagttcaaaaat
ttcattaaagtaactttcccaggtaacatcaaataccaggaatttcatgggactattggc
tactatattccaagcaaggaaatctgctggggaaaggtatttgaaattttggaggaagct
aaagtgctgttcaagttagaagactattctgtcaaacaagtaaccctggaacaaatcttt
ctgacctttgccaatactgataaaatgaaaacttatcaggaaataaagctacagtaa
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