Arvicanthis niloticus (African grass rat): 117713568
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Entry
117713568 CDS
T08817
Symbol
Simc1
Name
(RefSeq) SUMO-interacting motif-containing protein 1 isoform X1
KO
K28408
SUMO-interacting motif-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117713568 (Simc1)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117713568 (Simc1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
117713568
NCBI-ProteinID:
XP_034365728
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All DBs
Position
8:complement(9483092..9529595)
Genome browser
AA seq
1271 aa
AA seq
DB search
MEDFIVISDDSGSESSAGTRSGRARRLRRALSRTPGALPRRTVDFIDLTRETRTRAKDRN
GLCVIDLTRSEEENRPIATLDLTLEPVASSQKEPPSLQTCTSLSGKEVMEAHEDRGSQPT
AQRIINNDPVDLDLLEENLFEGSRPPTSISQDSVYPPEPNCSSTTYKGDLSFLTSLQLSS
DVSSFSSTSNQRASLPCSQQDVPCQSQGLLCPLQALSCPQRASPCPPRASSCPPQALSCP
PQALSCPSQTLSCPSQALSCPSQTVQCQLQALPQPPQEVPCSTQNVPCPQQNMPSTPQDL
WHPRHILYISQNTLGLPQDVPGQPQNVSYAQDVTQLQDMPWSLQDMPLSLQDMLQSLQDV
PPLLGDVSQSPEVMQLPGYVTQSSRDVIQSPAGVIQSSGCLMQSSGSVTQSLRSVMQSPE
GVTQSLRSVMQSSGGMTQSLRSVMQSPGGVMQSSGGMMQSSGVTQSVRSMMQSSGGVMQS
PGGVMQSPGGVMQSPGGVMQSPGGVMQSPGGVTQSLKSMMQSPGSVIQSSSGVPQSSRDR
MLSPGSVSQSSGDAIQSPGGVPQSSKDRMQLPGDVPSASGDAIQSQGGVPWSSRDKMQSS
GGASLASGDAIQSSGGVSPASGDAIQSQGGVPRSSRDRMQSSGGVPPASGDVIQSPGGMS
PASGDATQSPGGVSPASGDMIQSAGGVPPSSGDVIQSAGGVSQSPSNALQSPVNMSESLG
DTPNLSREMSHSPQVLLDLARDRPKSSPNDVQNSDPPMNISAPSSPGCSTNPLSPQSEFS
LERAPWLTITDSSARKERSLPQLANPGSAQIQGQIPQVGVYNRPCLHRLKYFLRPPVHHL
FFQTLIPDKDTRESKGQKLEPIPHRRLRMVTNTIEENFPLGTVQFLMDFVSPQHYPPREI
VAHIIQKILLSGSETVDVLKEAYMLLMKIQQLHPANAKTVEWDWKLLTYVMEEEGQTLPG
RVLFLRYVVQTLEDDFQQILRRQRQHLQQSIANTVLSCDKQPHNVRDVIKWLVKAVTENE
LTPPQDETQTSPGTGLLKTSSDHLSSQPNLNRNTNQLIVCQLQRMLSIAVEVDRTPTCSS
NKIAEMMFGFVLDIPERSQREMFFTTMESHLLRCKVLEIIFLHSCETPTRLPLSLAQTLY
FLNNSTSLLKCQSDKTQWQTWDELVEHLQFLLSSYQHVLREHLRSSVIDRKDLIIKRIKP
KPQQGDDITALDVEKQIEAFRSRLVHILGEPLVPQLQDKVHLLKLLLFYAADLNPDTEPA
SEHRGSQISKH
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaggactttatcgtcatctccgacgacagtggctccgagagctcggccgggacccgt
tcgggcagggcgcggaggctgcgccgggccctgtcccggacccccggcgcgctgccccgc
cgaaccgtggactttattgacttaactagagaaacccgaacaagggcaaaagaccgaaat
ggactctgtgtgattgatctgacaagaagtgaggaagaaaataggcctattgccactctt
gatttgactttagaacctgtagcttcctctcagaaggagccacccagtcttcagacatgt
accagtctctcgggcaaagaggtgatggaagcccatgaagatagaggctctcagcctaca
gcacagagaatcattaacaatgatcctgtagacttggatttgttagaggaaaacctattt
gaaggctctcgaccccctacatccatcagccaggactctgtttatccaccagaaccaaac
tgtagctcaaccacatataaaggtgacctcagcttcttgacaagtctacagctctcttca
gatgttagctccttctcctccacaagcaatcagagggcctctttgccatgctcacagcaa
gatgtgccttgtcaatcacaaggcttgctatgtccactacaggccttatcatgcccacaa
agagcttcaccatgtccaccacgagcttcctcatgcccaccacaagccttgtcatgccca
ccacaagctttgtcatgtccatcacaaactctgtcatgcccatcacaagccttgtcatgc
ccatcacaaactgtacagtgccaactccaagctttgcctcagccacctcaagaagtgcca
tgttctacccaaaatgtaccatgccctcagcagaatatgccaagcacacctcaagactta
tggcatcctcgacacatcctatacatatcccaaaacactctgggcctacctcaagatgtt
ccaggccaacctcaaaatgtgtcatatgcacaagatgtgacacaactgcaagacatgcca
tggtcactgcaagacatgccactgtcactacaagacatgctacagtcactgcaagatgtg
ccaccattgctgggagatgtgtcacagtcaccagaagtgatgcagttaccaggatatgtg
acacagtcatcaagagatgtgattcagtcaccggcaggcgtgatacagtcatcaggatgt
ttgatgcagtcatcaggaagtgtgacacaatcactaagaagtgtgatgcagtcaccagaa
ggtgtgacacagtcactaagaagtgtaatgcagtcatcaggaggtatgacacagtcacta
agaagtgtgatgcagtcaccaggaggtgtgatgcagtcatcgggaggaatgatgcagtca
tcaggtgtgacacagtcagtaagaagtatgatgcagtcatcaggaggtgtgatgcagtca
ccaggaggagtgatgcagtcaccaggaggagtgatgcagtcaccaggaggagtgatgcag
tcaccaggaggagtgatgcagtcaccaggaggagtgacgcagtcactaaaaagtatgatg
cagtcaccaggaagtgtgatacagtcatcatcaggtgtgccacagtcatcaagagatagg
atgctgtcaccaggaagtgtgtcacagtcatcaggagatgcaatacagtcaccaggaggt
gtgccacagtcatcaaaagataggatgcagttgccaggagatgtgccatcggcatcagga
gatgcgatacagtcacaaggaggtgtgccatggtcatcaagagataagatgcagtcatca
ggaggtgcgtcactggcatcaggagatgcgatacagtcatcaggaggtgtgtcaccagca
tcaggagatgcgatacagtcacaaggaggtgtgccacggtcatcaagagataggatgcag
tcatcaggaggtgtgccaccagcatctggagatgtgatacagtcaccaggaggtatgtca
ccggcatcaggtgatgcaacacagtcaccaggaggtgtgtcaccagcatcaggagatatg
atacagtcagcaggaggtgtgccaccatcatcaggagatgtgatacagtcagcaggaggt
gtgtcacagtcacctagcaatgcattgcagtcaccagtcaatatgtcagagtcacttgga
gacacaccaaacttatcaagagagatgtcacactcaccacaagtgttattggacttagca
agagacaggccaaagtcttccccgaatgatgtgcagaacagtgatcctcctatgaatatc
tcagctccatcctctccaggttgctctactaacccactatctccacagtctgaattttcc
ttagaaagagctccttggctcactatcacagatagctcagccagaaaagagagatcactg
ccacagcttgccaatcctgggtctgcccagatacaaggacaaataccacaagttggagta
tacaatagaccttgcctgcacagactgaaatacttcttacggcctccagttcatcatctc
ttcttccagacattaatcccagataaagatacacgagagagcaagggtcagaaattagaa
cccatccctcatcgaagactaagaatggtgacaaacactattgaagaaaacttccctttg
gggactgtgcagtttttaatggactttgtttcaccccaacattacccacccagagaaatt
gtggctcacatcatccagaaaatcctgctcagtggctctgagactgtggatgtcctcaag
gaggcctacatgcttctcatgaaaattcaacagctgcatccagccaatgccaagacagtg
gagtgggactggaaactgctcacctatgtcatggaggaagagggacaaactctgcctgga
cgcgttctctttctacgctatgtagtgcagacccttgaagatgacttccagcagatcttg
aggagacagcggcagcacttacagcaatccattgcaaacactgtcctgtcatgtgacaaa
cagccccacaacgtcagagatgttatcaagtggctggtcaaagcagtgactgaaaatgaa
ttaactccaccccaggatgagactcagacctctccaggaacaggactcttgaaaactagc
agtgaccacctgtcttcccagcctaacctgaacaggaacaccaatcaactgattgtgtgt
cagcttcagaggatgttgtccatcgctgtagaggtggacaggactccaacctgcagctcc
aataaaatagccgagatgatgtttgggtttgtgctggatatccctgagaggagccagagg
gagatgttcttcactaccatggagagccaccttctgcgatgcaaagtcttagagatcata
ttcctccacagttgtgagactccaacccgtctccccttgtctctggcccagaccctctat
tttctgaacaattccacatccctgctcaagtgtcagtcagataaaacccagtggcagacg
tgggatgagctggttgaacatctgcaattcctgctgtccagttaccaacacgtgctgaga
gagcacctgcggagctcagtgattgatcggaaagacttgatcatcaaaagaattaagccc
aagccccaacaaggagatgacattacggcgcttgatgtggagaagcagattgaggccttc
cgcagccgcctggtccatatactgggagaacctttagtcccccagctccaagacaaagtg
catttgttgaagctgctgctcttctacgctgcagacttgaaccctgacacagaacctgcc
tcagagcacagaggcagccagatctctaagcactga
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