Arvicanthis niloticus (African grass rat): 117713630
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Entry
117713630 CDS
T08817
Symbol
Atg4d
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04136
Autophagy - other
anu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117713630 (Atg4d)
04136 Autophagy - other
117713630 (Atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117713630 (Atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117713630 (Atg4d)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117713630 (Atg4d)
Peptidases and inhibitors [BR:
anu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
117713630 (Atg4d)
Membrane trafficking [BR:
anu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117713630 (Atg4d)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117713630 (Atg4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
117713630
NCBI-ProteinID:
XP_034365875
LinkDB
All DBs
Position
8:complement(86823285..86837389)
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AA seq
474 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPDCRRPRGQTRIPDPSNLGPSGSGVAALGSSGTDPAEPD
EVDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRCYHFEGEGDIQRFQRDFVSRL
WLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWRWVEGTGLASSEMP
GPASPSRYRGPGRRGPPRWTQGPLEMEQDRWHRRIVSWFADHPQAPFGLHRLVELGWSSG
KKAGDWYGPSVVAHIVRKAVESCSEVTHLVVYVSQDCTVYKADVARLVSWPDPTAEWKSV
VILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYC
QPTVDVSQANFPLESYHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSP
VTERYPMFTVAEGHAQDHSLDALCTQLSQPTLRLPCTGRLLKAKRPSSEDFVFL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgcggcgcagtaccgcagcgggagcccggaggacgcgcgc
cggcccgattgtcgccggccgaggggacaaacccggatcccggatcccagcaacctagga
ccttcggggtccggagtggcagctctcggctcatctgggaccgaccccgccgagcctgac
gaggtggacaagttcaaagccaagttcctgacagcctggaacaacgtcaagtatggttgg
gcggttaaaagccggaccagcttcagcaagatctccagtgttcacctctgcgggcgatgc
taccatttcgagggagagggtgacatccagcggtttcaaagggactttgtatctcgacta
tggctcacatatcgccgggacttcccacccctagctgggggcagcctgacctcagattgt
ggctggggatgtatgttacgaagtggtcagatgatgctggctcagggcttgctcctgcat
tttctgcctagagactggaggtgggtggagggcacaggactggcttcctctgagatgcct
gggccagcctctcccagtcgctaccgagggcctggtcgtcgtgggccccctcgatggacc
caaggtccactggagatggaacaggatcgttggcaccggcggatcgtttcctggtttgct
gatcatcctcaggccccctttggtctacaccggctagtggagcttgggtggagctctggc
aagaaggcaggagactggtacgggccctctgtggtggcacacatcgtcaggaaagctgtg
gagagttgctcagaagtcacccacctggtggtgtacgtctctcaggactgcacagtgtac
aaggcagatgtggcacgcctggtgtcctggccagatcccacagcagagtggaagtctgtg
gtcatcctggtgcctgtacggctgggtggggagacccttaaccctgtgtatgtgccctgt
gtgaaggagcttctgcgctcagaactctgcctgggcattatggggggcaaaccccggcat
tcactgtacttcattggctatcaggacgacttcctgctctacctggatccccactactgc
cagcccacagtggatgtcagccaggccaacttccccttggagtcctatcactgcacctcg
ccccgcaagatggcctttgccaagatggaccccagctgtaccgtggggttctatgctggg
aacaggaaggagtttgagacactctgctcggagctgatgaggatcctcagctcctcccca
gtcacggaacggtaccccatgttcacagtggctgagggccacgctcaggaccacagcctg
gatgccctctgcacccagctctcccagcccacactgcggctaccttgcacaggacgccta
ctcaaggccaaaaggcccagctctgaggactttgtgtttttataa
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