Arvicanthis niloticus (African grass rat): 117713639
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Entry
117713639 CDS
T08817
Symbol
Zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05202
Transcriptional misregulation in cancer
anu05206
MicroRNAs in cancer
anu05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
117713639 (Zeb1)
05206 MicroRNAs in cancer
117713639 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
117713639 (Zeb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117713639 (Zeb1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
117713639 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
Zn_SUZ12
zf-C2HE
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
117713639
NCBI-ProteinID:
XP_034365888
LinkDB
All DBs
Position
8:74047532..74220039
Genome browser
AA seq
1115 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVEANSDSDDEDKLHIVEEESITDAADCEGVPDDE
LPADQTVLPGGSDRGGGAKSCWQDDVKDDDCDSDAENEQNHDPNVEEFLQQQDTAVIYPE
APEDDQRQGTPDASGHDENGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNFS
CSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLRI
HSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLVPVNGRPRSGLKTSQCSSPSLSTSPG
SPTRPQIRQKIENKPLQEPLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGQL
QATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLENNQASLASKEQ
EAVSASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKKENPAPTN
SCKSEKLPEDLTVKSEKDKSFDGAGAGDDSTCLLCEDCPGDLNALPELKHYNPEHPAQPA
PPALATEKPESSASSAGNGDLSPSQPPLKNLLSLLKAYYALNAQPSTEELSKIADSVNLP
LDVVKKWFEKMQAGQIPGQSPEPTSPGTGSVNIPAKTDEQPQTADGNEPQEDSTHEQSAL
KVTGSPILPVGSAMNGSRSCTSSPSPLNLSSARNPQGYSCVAEGAQEEPQVEPLDLSLPK
QQGELLERSMVSSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVVPPSANPIN
IAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSATVSPAVQEPPVKVI
QPNGSQDERQDTSSEGVSTVEDQNDSDSTPPKKKTRKTENGMYACDLCDKIFQKSSSLLR
HKYEHTGKRPHECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNH
RYSYCKRGAEDRDTMEQEDAGPEVLPEVLPEVLTTEHVGAQASPSQADSDERESLTREED
EDSEKEEEEEEDKEMEELQEEKECENPQGEEEEEEEEEEEEEEEEEVEEAEHEAAAKTDG
SVEDGAAQQAGGLEQKASESESESEQLSEEKTNEA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaagcaaattcagattccgatgatgaagacaaactccat
attgtggaagaagaaagtatcacagatgcggctgactgtgaaggtgtaccagacgacgag
ctgccagcagaccagacagtgttaccaggaggcagtgacagggggggcggggccaagagc
tgctggcaagacgacgtaaaagatgatgactgcgactcagatgcagaaaatgagcaaaac
catgatcccaatgtggaagagttcctgcagcagcaggacaccgctgtcatctaccccgaa
gcgcccgaggatgaccagcggcagggcacgccagatgccagcggccatgacgaaaacgga
acaccagatgcattttcccagttgctcacctgcccgtattgtgatcgaggctacaagcgc
tttacctctttgaaagaacacattaagtaccgccatgagaagaacgaggacaacttcagc
tgctccctgtgcagttacacctttgcatacagaacccagcttgaacgtcatatgacatca
cataagtcaggaagagagcaaagacatgtgacacagtctgggggtaaccgtaaattcaag
tgcactgaatgtgggaaagccttcaagtacaaacaccacctgaaagagcacttacggatt
cacagtggagagaagccatatgaatgcccaaactgcaagaagcgcttttcccattccggc
tcctatagctcgcacataagcagtaagaagtgtattagcttggtgcctgtgaatggtagg
cccaggtcaggactcaagacatctcagtgttcctcaccatctctttcaacatcaccaggc
agtcccacacggccacagatacggcagaagatagagaataaaccccttcaagaaccgctt
tctgtaaaccaaatcaaaactgaacctgtggattatgagttcaaacccatagtggttgct
tcaggaatcaactgttcaacccctttacaaaatggggtttttagcggtggtggccaattg
caggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagttggtttg
gtatctcccataagtatcaacttaagtgacattcagaatgtacttaaagtggctgtagat
ggtaatgtaatacgacaagttttggagaataatcaagccagtcttgcatccaaagagcaa
gaagcagtgagtgcttcgtccatccagcagggtggccattctgtcatctctgccatcagt
cttcctttagttgaccaggatggaacaaccaaaattatcatcaactacagtcttgagcag
cccagccagcttcaggttgttccccagaatttaaagaaagaaaacccagcccctacaaac
agctgcaaaagtgagaaattaccagaagatcttactgtcaaatctgagaaggacaaaagc
tttgatggggccggggccggggacgatagcacttgccttctgtgtgaggattgcccaggg
gacctcaatgcacttccagaactaaagcactataacccagagcaccctgctcagcctgca
ccccctgccctggccaccgagaagccagagtcctctgcttcatcagctggaaatggagac
ttgtctcccagtcagccacctttaaagaaccttctgtcactcttaaaagcctactatgct
ctgaacgcgcagccgagcacagaagagctctcaaagattgccgattctgtgaacctaccg
ctggatgtagttaaaaagtggtttgaaaagatgcaagctggacagattccggggcagtct
cctgaaccaacttctccaggaacggggtcagtaaacatccctgcaaaaaccgacgagcag
cctcaaaccgcggacggaaatgagccccaggaagacagcacacatgaacagagtgctctc
aaggtgaccggctctccgattttaccagtaggatcagccatgaacggttccagaagctgc
acatcatccccttcccctctaaacctttcctcagccaggaacccgcagggttactcttgt
gtggcagagggtgcccaggaggagccccaagtagaacctcttgatctctcactaccaaag
caacagggagagttactggaaaggtcgatggtcagtagcgtttaccagaacagtgtttat
tctgtccaggaagagcccttgaacttgtcttgtgcaaaaaaggagccacaaaaggacagc
tgtgttacagactcagaaccagttgtaaatgtagtcccaccaagtgccaaccccataaac
attgctattcctacagtcactgcccagttacccacaatcgtggccattgccgaccagaac
agtgttccgtgcttacgggcacttgccgccaacaagcagactattctgattcctcaagtg
gcatatacatactcagctacagtcagccctgccgtgcaggagccaccagtgaaggtgatc
cagccaaatggaagccaggatgaaagacaagacactagctcagaaggagtctccactgtg
gaggatcagaatgactctgactccacaccacccaaaaagaaaactcggaagacagagaat
ggaatgtatgcttgtgacctgtgtgacaagatatttcaaaagagcagctcactgttaaga
cacaaatatgagcacacaggtaagaggcctcatgagtgtggaatctgtagaaaggcattt
aaacacaagcatcatttgatcgagcacatgcgcctgcactctggggaaaagccctatcaa
tgtgacaagtgtggcaagcgcttctcacactcgggctcctactctcagcacatgaatcac
cgctactcctactgcaagagaggagctgaagacagagacaccatggagcaggaagacgct
gggccggaagtcctgccggaagtcctgccagaagtcctgacgacagagcatgttggtgcc
caggcatctccctcacaggctgactcggacgagagagaaagtttgacaagggaagaggat
gaagacagtgaaaaggaggaggaggaagaggaggataaagagatggaagaattgcaggaa
gaaaaggaatgtgagaacccacagggggaggaggaggaagaggaggaagaggaagaagag
gaagaagaggaagaggaggtagaggaagctgagcatgaggcagcagctaagactgatggt
tcagtggaggatggagctgcccagcaggcaggtggcttagagcagaaggccagcgagagt
gagagcgagagcgagcaactgtctgaagagaagacaaatgaagcttag
DBGET
integrated database retrieval system
