Arvicanthis niloticus (African grass rat): 117713661
Help
Entry
117713661 CDS
T08817
Symbol
Nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu03250
Viral life cycle - HIV-1
anu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117713661 (Nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117713661 (Nup153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117713661 (Nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117713661 (Nup153)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117713661 (Nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
117713661
NCBI-ProteinID:
XP_034365946
LinkDB
All DBs
Position
8:16700214..16752570
Genome browser
AA seq
1464 aa
AA seq
DB search
MASGAGGIGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYFN
KSENACSCSPDADEVPPWPENREDEHAIYADENSNTDDGRITPEPAGSNTEEPSTTSTAS
HYPDVLTRPSLHRSHLNFSVLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
ISTTSGFSSRASEKDIAVSKNTSVPPLWSPEAERSHSLSQHTAISSKKPAFNLSAFGTLS
TSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRSTPYQAPVRRQMKAKQLNVQS
YGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLDRSGIDSTVFQAKKEKVDSQ
YPPVQRLMTPKPVSIATNRTVYFKPSLAPSGDLRKTNQRIDKKNSTVDEKNISRQNREQE
SGFSYPSFSIPAANGLSSGVGGGGGKMRRERTHFVAPKPLEEEVEAPLLPQISLPISSSS
LPTFSFSSPVTSASPSPVGPSQPLSNKVQMTSLGSTGSPVFTFSSPIVKSTQADVLPPAS
IGFTFSVPLAKTELSGSNSSSETVLSSSAQDNTVVNSSSCKKRNAPCEEPFKPAKILREG
SVLDILKTPGFMSPKVDSPALQPTTTNSIVYTRPAISTFSSSGIEFGESLKAGSSWQCDT
CLLQNKVTDNKCIACQAAKLPLKETAKQTGIGTPSKSDKPASTSGTGFGDKFKPAIGTWD
CDTCLVQNKPEAVKCVACETPKPGTGVKRVLTLTVASESPVTASSSSTTVTTGGVTLGFG
DNFKRPVGSWECPVCSVCNKAEDNRCVSCTSEKPGLVSASSSSSVPVSLSSGGCLGLDKF
KKPEGSWDCEVCLVQNKADSTKCIACESAKPGTNSEFKGFGTSSSLNPAPPAFKFGIPSS
SSELSQTLTSTGNFKFGDQGGFKLGTSSDSGSTNTMNTNFKFPKPTGDFKFGVLPDSKPE
EIKNDSKNDNFQFGPSGLSNPASSAPCQFGVSTLGQQENKEELPKSSSAGFSFGAGVNNP
PSAAIDTTVTSENKSGFNFGTLDTKSVSVTPFTCKTTEAKKEDASATKGGFTFGKVDSAS
LPSASMFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDESSSKPTF
SFSVAKPSVKESDQLAKATFAFGNQTNTTTDQGAAKPVFSFLNSSSSSSSAPATLSSGGI
FGSSTSSSNPPVAAFVFGQASNPVSSSAFGNSAESSTSQPLLFPQDSKPATTSSTASAAS
PFVFGTGASSNSTVSSGFTFGATTTSSSSGSSFVFGTGHSAPSASPAFGANQTPTFGQSQ
GASQPNPPSFGSISSSTALFSAGSQPVPPPTFGTVSSSSQPPVFGQQPSQSAFGSGTANA
SSVFQFGSSTTNFNFTNNNPSGVFTFGASPSTPAASAQPSGSGAFSFSQSPASFTVGSNG
KNMFSSSGTSVSGRKIRTAVRRKK
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggagccggaggcataggagggggcggcggcggcaagatccggacgcgtcgt
tgccaccaggggccggtgaagccttaccagcaagggcgaccccaacaccagggcattctt
agcagagttacagaatctgttaagaatattgtaccggggtggctacaaagatacttcaac
aagagtgaaaatgcctgtagctgttcaccagatgcagatgaagttccaccctggccagaa
aatagagaagatgagcatgcaatttatgcggatgagaactcaaacactgatgatgggaga
atcacccctgagcccgcaggcagtaatacagaagaaccatcaacgaccagtactgcttca
cattatccagatgtgttaacaagaccctctcttcatcggagtcatctgaatttctctgtg
ttggaatctcctgctttgcactgtcagccttccacgtcctctgcgttcccaatcggcagt
tctggattttcccttgtgaaggagattaaagattctacctctcagcatgatgatgataac
atctcaactaccagtgggttctcttcaagagcttctgagaaagatatagctgtttcgaag
aacacttccgtaccacctttgtggtcccccgaagcagaacgttctcattcactctcacag
catactgccatcagctccaaaaaaccagcattcaacttgtctgcctttggaacactttcc
acctcacttgggaattcttcaattcttaaaacaagtcagcttggagactctcctttttat
cctggcaaaacaacatatggtggggcagctgctgctgtaagacagaataaagtacgaagt
acaccgtaccaggctccagttagaagacagatgaaagctaagcagctcaatgtacagtct
tatggtgtgaccagttcaacagcacggcggatattgcaatcattagaaaagatgtcaagc
cctcttgcggatgcaaaaagaattccatctgctgtttcttctcctctgaattctcctctt
gataggagtgggatagatagcacagtttttcaggcaaaaaaagaaaaggtggactctcag
tatccccctgttcagagactaatgaccccaaagccagtttccatagcaacaaatagaact
gtctattttaaaccatctctggccccatctggtgacttaaggaagactaatcaaaggata
gataaaaagaacagtactgtagatgaaaaaaatatctcaagacaaaatagagagcaagaa
agtggcttttcataccccagtttcagtattcctgcagccaatggtttatcttctggagta
ggtggtggaggtggcaagatgagaagagagagaacacattttgttgctcctaaaccttta
gaggaggaagtggaagcaccattgttaccgcaaatctctctaccaatcagcagttcttca
cttcccaccttcagttttagttcccccgtgacctcggcttctccgtcaccagtcggccct
tctcaaccattatcaaacaaggtacagatgacctctctgggcagcacgggcagtcctgtg
ttcacattttcatctcccattgtaaaatctacgcaggcagatgtgctacctccagcatct
attggatttacatttagtgtgcctcttgcaaaaacagaactttctggctctaatagttct
tcagaaacagttttaagtagttcagctcaagataacactgtagtaaatagttcaagctgt
aagaagcgaaatgccccttgtgaggagccttttaaacctgcaaagatcctgagagaagga
agtgttctagacatcctgaaaacgcctggtttcatgtcaccaaaggttgattctcctgct
cttcaacccactaccacaaactcaatagtttatacaagaccagcaataagtactttctct
tctagtggaattgagtttggagaaagtttaaaagctggatcatcttggcagtgtgacaca
tgtctactccagaacaaagtcacagacaataagtgtatagcctgtcaagcagcaaaactg
ccactgaaagaaactgctaaacagactggaattgggacaccaagcaaaagtgacaaacca
gcttctacatcagggacaggctttggagataaatttaaaccagcaataggaacttgggat
tgtgatacctgtttagtgcaaaataagcccgaagcagtaaaatgtgtagcctgtgaaaca
cccaaacctggcactggtgtgaagcgagtccttacattgacagtggcttcagaaagtcct
gtgactgcttcctcctcttctaccactgtgaccactggtggtgtgacactaggatttgga
gataactttaaaaggcctgtgggatcttgggagtgtccagtatgctctgtttgtaataag
gcagaagacaacagatgtgtctcctgtacgtctgagaaaccaggtttagtatctgcctca
agcagcagctctgtcccagtctctctgtcttctggaggctgtttaggattggacaagttt
aaaaagcccgagggaagctgggactgtgaagtgtgcctagtgcaaaataaagcagactct
accaagtgcatagcttgtgaaagtgcaaagccaggcacaaattctgaatttaaaggcttt
gggacatcttcatctttaaatccagcacccccagccttcaaatttggtattccatcatcc
tcttctgagctttctcaaactttgacaagcactggaaattttaaatttggagatcaggga
ggattcaaattaggcacttcatctgactctgggtctacaaacaccatgaatacaaacttt
aaatttcctaaaccaactggagattttaaatttggagtgttacctgattctaaacctgag
gaaattaaaaatgacagcaagaatgataattttcagtttggaccttctggcttaagcaac
ccagcttcttcagctccatgtcagtttggggtatctactcttgggcaacaagaaaataaa
gaggaactgcctaagtcttcatctgcaggttttagctttggcgcaggtgttaataacccc
cccagtgctgctatcgacaccacagtgacctcagagaacaagagcggcttcaactttgga
accctagacactaagagtgtctcagtgactcctttcacatgcaagacaacagaagcaaag
aaagaagatgcatctgctaccaagggtgggttcacatttggtaaagtggactctgcttct
ttgccatctgcctcaatgtttgttttgggaaggacagaggagaaacagcaagaacctgtt
acttctacttctctggtatttggaaagaaagccgacaatgaggagccaaagtgtcaacca
gtattttcctttggaaattcagaacaaaccaaagatgaaagttcctccaagccgacattc
agtttcagtgtggcaaaaccatctgtgaaggagtctgatcagctagccaaggctacgttt
gcatttggaaatcaaaccaatacaacaactgatcaaggtgcagcaaagccagtttttagc
ttcttgaacagcagttcctctagctcaagtgcaccggccactttatccagtggtggcata
tttggtagttccacctcttcctccaacccgcctgtggcagcctttgtttttggacaggcc
agcaatcctgtcagcagctctgccttcggtaattctgccgagtccagtacatctcagcct
ttgctgtttcctcaagatagcaagccagccaccacgtccagcactgcctcagctgcctct
ccgtttgtatttggaacaggagccagtagtaatagtactgtatcttctgggttcactttt
ggggctacaaccacgtcaagctcttcaggatcctcctttgtatttggcactggacattca
gcaccatctgccagtccagcatttggtgctaaccagactccaacatttggacaaagtcaa
ggtgccagccagcctaaccctccaagctttggctctatctcgtcttcaacagcgttattt
tctgctggttctcagcctgtaccaccacctacatttgggacagtttcaagcagcagccaa
cctcctgtatttggacagcagcccagtcagtctgcatttggctctgggacagccaatgcc
agttcggttttccaatttggtagcagcactacaaatttcaactttacaaacaataatcca
tcaggagtgttcacatttggtgcaagtcccagcacacctgcagcctcagcccagccctca
ggttcaggggccttttcattcagccagtctccagcatcatttacagtggggtcaaatggg
aaaaatatgttctcttcttccggaacttcagtttctggtcgcaagataaggactgctgtt
agacgcaagaaataa
DBGET
integrated database retrieval system
