Arvicanthis niloticus (African grass rat): 117713781
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Entry
117713781 CDS
T08817
Symbol
Sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04517
IgSF CAM signaling
anu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117713781 (Sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117713781 (Sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117713781 (Sptbn4)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117713781 (Sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
117713781 (Sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
RASSF_helical
Rv3651-like_N
PH_11
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
117713781
NCBI-ProteinID:
XP_034366132
LinkDB
All DBs
Position
1:complement(5926168..6013785)
Genome browser
AA seq
2561 aa
AA seq
DB search
MAQVPGEVDNMEGPAASNNNNPAARWESPDRGWDREPPAAANAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDLSKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVDKIIERYEELAAELLAWIHRTVDLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRAHNRRLFVPREGCGIWDIDKAWGELEKAEHEREAALRA
ELIRQEKLELLAQRFDHKAAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQTQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLSELQEQAARRRAELEASRSLWALLQELEEAESW
ARDKERLLEATSGSGGAAGAAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALRRGEE
LAAAGSSAGPGAEPLHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLDG
LLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATLGGASG
AGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQWL
LAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNQTVQELVEGGHPSSDEVRSCQDH
LNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGALQWRL
SGLEAALQALEPRQAALLEEAALLAERFPAQATRLHQGAEELGAEWGALAGAAQVCGEAV
AAASRLQRFLRDLDTFLDWLVRAQEAAGAVEGPLPRSLEEADGLLARHAALKEEVDQREE
DYARILAASEALLASDGAELGPGLALDEWLPHLEVGWHKLLGLWEERREALVQAHVYQLF
LRDLCQALAVLRNQEVALSGAELPCTVESVEEAMKRHRDFLTTMELNQQKMQVAVQAAES
LLRQGNAYGEQAQEAVARLLEKSQENQLRAQQWMQKLLDQLVLQHFLRDCHELDGWIHEK
MLMARDGTREDSHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRKK
LGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKRLLHMESQLQDVDPGGDLAT
VNSQLKKLQSMESQVEEWCREVGELQAQTAALPLEQASKELVGERQSAVGERLVRLLEPL
QERRRLLLASKELHQVAHDLDDELVWVQERLPLAMQTERGTGLQAVQQHIKKNQGLRREI
QAHGPRLEEVLERAGVLASLRSPEAEAVRRGQEQLQSAWTGLREAAERRQQTLDAAFQVE
QYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQC
RALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVSLEQQYWLYQLSRQVDELEHWIA
EKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHTAAAT
MAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTAPP
EPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVLQGW
KELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVLMNYH
QGLKTELEARVPELTACQELGHSLLLNKSAMADEIQAQLDKLGSRKEEVSEKWDRHWEWL
QQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERF
SSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYDRGLEPLARRA
SDTLSAEVRTRVGYVRQELKPERLQPRIDRLPETSGKVEPAAPTAGALDTTDTPGTPVVT
EQVRPRSERQELADRAEELPRRRRSERQESTDQPEEAARRRRPERQESADHEGSHSLTLG
RYEQMERRRERRERRIERQESSEQETPTRGELVKGKATLADIVEQLQEKEAGPGLPAGVP
SLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPA
QGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDSKGP
ASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAVA
SSVAEHAEIARWGQTLPTTSSTDEGNPKREGGERRASGRRK
NT seq
7686 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagtaccaggggaagtggacaacatggagggcccagcagcctccaacaacaac
aaccctgcagcccgctgggagagcccagatcggggctgggatcgggagcctccagcagcc
gccaacgctgctgcttccctctttgagtgctctcggatcaaggccttagcagatgagcga
gaggctgtgcagaagaaaaccttcaccaagtgggtgaattcgcacctcgcccgcgtgggc
tgccacatcggagacctgtatgcagatcttcgggatgggtttgtgctcacccggctcctg
gaagtgctgtcgggggagcagctgccgaggcccactcgcggccgcatgcggatccactcg
ttggagaacgtggacaaggctctgcagttcctgaaggagcagcgtgtgcacctggagaac
gtggggtcacatgacatcgtggatgggaaccaccgactgacgctggggctggtctggacc
atcatcctgcgctttcagattcaagtcatcaagattgagacagaagacaacagagagacc
cgctcagccaaggacgctctgctcttgtggtgccagatgaaaacagctggttaccctgag
gtaaacatccagaatttcactaccagctggagagatggcctggccttcaatgccctcatc
catcgtcacaggcctgatcttgtggacctcagcaaacttaccaagtccaacgccaactac
aacctgcagagagctttccgtacagccgagcagcacctggggctagcacgtctgctggac
cccgaagatgtgaacatggaggctccagatgagaaatccatcatcacctacgtggtctcc
ttctaccactacttctccaagatgaaggctctggctgtggagggaaagcggattgggaag
gtcctggaccaggtgttggaggtggacaagatcatagagcgctacgaggagctggcggcg
gagctgctggcctggatccaccgcaccgtggacctcatcagcaaccaaaagtttgccaac
tcattgagtggggtgcagcagcagctgcaggctttcactgcctactgtacgctggagaag
cccgtcaagtttcaggagaaggggaacttggaggtgctactcttcagcatccaaagcaaa
ctgcgcgcccacaaccggcgcctctttgtgcctcgagaaggctgtggcatctgggatatt
gacaaggcatggggtgagctggagaaggcagagcatgagcgggaggcggccctcagagct
gagctcatccgacaggagaagttggagctcttggctcaaagatttgaccacaaggcggcc
atgagggaaagctggctgaacgagaaccagcggctggtctctcaggacaactttggatat
gagctgccggcagtggaggcagccatgaagaagcatgaagccattgaggcagacatcgca
gcctatgaggagcgggttcagggtgtggcagagctagcccaggcattggcagctgaaggc
tactatgatgcccgtcgggtggcagcccagcgtgacagtgtccttcgccagtgggccctg
ctgactgggctggtaggtgcccggcggacccggcttgagcagaatctggccctacagaag
gtcttccaggagatggtctacatggtggactggatggaggagatgcagactcagctgctg
tctcgggagtgtgggcagcatctggtggaggccgacgacctgctgcagaaacacgggctc
ctggagggggacatcgcagcccagagtgagcgggtggaggccctcaatgctgcggccctg
agattctcccagttgcagggctatcagccctgcgaccctcaggtcatttgcaaccgtgtg
aaccacgtgcacggctgtctgtcggagctgcaggagcaggcggcgcggcggcgcgcggag
ctggaagcctctcggagcctgtgggcgctgctgcaggagctggaggaggccgagagctgg
gcgagggacaaggagcgcctcctagaggccaccagtggcagtggtggcgcggcgggcgcg
gcgggcggtgctcacgacctgtccagcaccgctcgcctgctggcgcagcacaagatcctg
cagggcgagctgggcggccggcgggcgctgctgcagcaggcgctgcgtcgcggggaggaa
ttggctgcggcgggcagctccgcgggcccgggcgccgagcccttgcacttggctggtctg
gcggagcgcgcggctagcgctcggcgccgctggcagcggctggaagaggcggctgcgcgc
cgggaacggaggctgcaggaggcgcgagcgctgcaccagtttggcgctgacctggacggt
ctcctggactggcttcgcgacgcgtatcgtctggcagccgccggagatttcggtcacgac
gaagcgtccagccgtcgcctggcgcgccagcaccgcgctctcaccggggaggtggaagcg
caccgtggccctgtgggtggcctgaggcgccagctggcgacactgggaggagccagtggc
gccgggccgctggtggtggcactgcaggtgcgcgtggtggaagcggaacagttgttcgca
gaggtgaccgaggtggccgcgctgcgccgacagtggcttcgggacgcgctcgccgtgtac
cgcatgttcggcgaggtgcatgcctgcgagttatggatcggagagaaagagcagtggctt
ctggccatgcgtgtgccagattccctcgacgacgttgaggtggtgcaacaccgatttgaa
agtctggaccaggaaatgaacagtctgatgggtcgagtcctggatgtgaaccaaacagtt
caggagttggtagaaggaggtcatcccagctccgatgaggtgcgttcctgtcaggaccat
ctcaacagcaggtggaaccgcatcgtggagctggtggaacaacgcaaagaggagatgagc
gccgtgctgctagtggagaaccatgtgctggaggtggcggaggtgcgcgcccaggtgcgc
gagaagcggagggcggtggagagcgcgccccgggcgggtggagccctgcagtggcgcctg
agtggcctggaggcggctctacaggcgctggagccgcgacaggcggcgctgctggaggag
gcggcgctgctggccgaacgcttccccgcacaggcgacgcgcctgcaccagggcgcggag
gagctgggagccgagtggggcgcactagccggagcggctcaggtttgcggcgaggcggtg
gcagcggcaagtcgcctgcagcgtttcctgcgcgatttggatactttcctggactggctg
gtgcgtgcgcaggaggcagcgggcgccgtcgaggggccgctgccgcgcagcctggaagag
gcggacgggctgctggcgcggcacgccgcgctcaaggaggaggtggatcagcgcgaggag
gactacgcgcgcatcctggctgccagcgaggcgctgctggcgtccgacggcgccgagctg
ggccccggtctggcgctagacgaatggctgccgcacctcgaggttggctggcacaaactg
ctcggcttgtgggaggagcgcagggaagcgctggtccaggcgcacgtgtatcagctcttc
ctgagagacctgtgccaggcgctcgcggtgctgcgcaaccaggaggtggcgctgtccggt
gctgaactcccttgcacagtggagtcggtagaagaggcgatgaaaaggcatcgggatttt
ctcaccacgatggagctgaaccagcaaaagatgcaggtggcggttcaagctgcagagagc
ctgctgcggcaaggcaacgcctacggggagcaggcgcaggaggcagtggctcggctgcta
gagaagagccaagaaaatcagctgagggcccagcagtggatgcaaaaactactggatcag
cttgtgctgcagcactttcttagagattgtcatgagctggatggctggatccatgagaag
atgctgatggctcgtgatggcacccgagaagacagccacaagctgcacaagagatggctc
cggcaccaggcgttcatggctgagctggctcagaataaagagtggctggagaagatagaa
agggagggccagcaactgatgcaggagaagccggagctggcagcctcggtgcgcaagaaa
ttaggtgagatccggcagtgctgggcggagctggagagcaccacacaggccaaggcacgc
cagctcttcgaggccagcaaagcggaccagctagtgcagagctttgcagagctggacaag
aggctgcttcacatggaaagccagctgcaagacgtagaccccggtggagacctggccact
gtcaacagccagctcaagaagctacagtccatggagtctcaggtggaagagtggtgccga
gaggtgggcgagctgcaggcacagacggcggcgcttccactggagcaggcaagcaaggag
ctggtgggcgagcggcagagcgcagtgggcgagcgcctggtgcgtctgctggagcctttg
caggagcgtcgccgcttgctgctggcatccaaggagctgcatcaggtggcgcacgacctg
gacgacgaattggtgtgggttcaagagcggctgccgctggccatgcagacagagcgaggt
actggcttgcaggctgtccagcagcacatcaaaaagaaccagggcctgcggcgggagatc
caggctcacgggccgcgcttggaggaggtgctggagcgcgcgggcgtgctggcctcactg
cgcagccctgaggccgaggcggtgcgccgcggccaggagcagctgcagagcgcctggacc
ggactgcgggaagcggccgaacggcggcagcagacgctggacgccgccttccaggtggaa
cagtactactttgacgtggctgaggtggaggcgtggctgggcgagcaggagctgctcatg
atgagtgaggacaagggcaaggatgaacagagcaccttgcaactgctcaagaagcatctg
caactggaacagggcgtggagaactatgaggaaagcatcgcccagctgtcgcgccagtgc
cgggcgctactggaaatgggacacccagacagtgagcagatcagccgacgacagtcccaa
gtggatcgcctctatgtggcgctcaaggagctgggtgaggagcgcagggtgagcctggaa
cagcagtactggctataccagctcagccgtcaggtggatgaactggaacactggatagcc
gagaaggaggtggtagccggctcaccggagctgggccaggactttgaacatgtgtcggtg
ctacaggagaaattctctgagttcgccagtgagacgggaaccgcagggcgggagcggctg
gcggcagtcaaccagatggtggacgagctgattgagtgtggccacacagcagcggccacc
atggctgagtggaaggacgggctgaacgaagcctgggctgaactgctagagctcatgggc
actcgggcccagcttctcgctgcctctcgggagctgcataagttcttcagcgatgcccgg
gagcttcaaggacagatcgaggagaagcggaggcggctgccccgcctgacggcaccacct
gagcccagacccagcgccagctccatgcagcggaccctgcgagcctttgagcacgacctg
cagctcctcgtgtcccaggtacggcagctgcaagagggggcggcccagctgcggacggtg
tacgccggcgaacacgccgaggctatcgccagccgtgagcaggaggtattgcaaggctgg
aaggagctgctggcagcctgtgaggatgctcgtctgcacgtcagctctacggccgacgcc
ctgcgcttccacagccaggcccgcgacctgctctcctggatggacggcatcgcaggccag
atcggggcagctgacaaacccagggacgtgtcatccgtggaggtgcttatgaactaccac
cagggcctgaagacagaactggaggctcgtgtgcctgagctgacagcctgccaggagctg
gggcattctctgttactcaacaaaagtgccatggctgacgagatccaggcacaactggac
aagctgggaagccggaaggaggaggtgtcggagaagtgggaccgtcactgggagtggctg
cagcagatgctggaggtacaccagtttgctcaggaggccgtggtggctgatgcctggctg
acagctcaggagccgctcctgcagagccgggagctaggcagcagtgtggatgaggtggaa
cagcttatccggcgacacgaggccttccgaaaagcagctgcggcgtgggaggagaggttc
agctctctgcggcgcttgaccacgatcgagaaactcaaggcagaacagagtaagcagcca
cccacccccttgctggggcgcaagttttttggggaccccacagagctggcggccaaggca
gcgcccttgctgcgtccagggggctatgacaggggcctggagcctttggcccgcagggcc
tcggacacgctgtcagcggaggtgcggacccgggttgggtatgtgcgccaggagctcaag
cccgagcgtctccagccgcgcattgaccggctgccggagacctcggggaaggtagaaccc
gcggcccctactgccggagcgttggacacgacggacacccctggaactccggtggtgacg
gagcaggtccggccccggtcggagcgccaggagttagcggatcgtgcggaggagctgcca
cggagacgaagatcagaacgccaggagtccacagatcaaccagaggaggcagcgcggagg
cgacggcctgagcgccaggagtccgcggaccacgaggggtcgcacagccttactctgggt
cgctatgagcagatggagaggcggcgggagcggcgggaacgacggatagaacgacaggaa
tctagcgaacaggagactcccaccagaggagagctggtcaaaggcaaggccaccctggct
gatattgtggagcagcttcaggagaaagaggcaggcccagggctccctgctggggtgccg
tcgctgcctcagcctcgcgagcttccccctggtcgcctgcccaacgggcttgagccgccc
gagcggacacctcggcccgatcggccgcgggcacgggaccggcccaagccgcgccggcgg
ccacggcctcgagagggtggtgagggcgggggaagccggcgctcgcgctccgcccctgcc
cagggaggctccgcccctgcgccgccacctccgcccactcacacagtgcagcacgagggc
ttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccggtcatgggtg
agcctctactgtgtgctcagcaagggggagctgggcttctacaaggactccaaaggccca
gcatcagggggaacacatggtggggagccactgctcagcttgcacaaagccaccagcgag
gtggcgagtgactacaagaaaaagaagcatgtcttcaagctccaaacccaggatggcagc
gagttcttgctccaggctaaagacgaggaggagatgaacggctggctggaggctgtggct
agctctgtggcagaacacgccgagatcgcccgatggggccagacactacctaccacatca
tccacagacgagggcaaccccaagcgtgagggcggggagcgtagggccagcgggcgccgg
aagtga
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integrated database retrieval system
