Arvicanthis niloticus (African grass rat): 117713868
Help
Entry
117713868 CDS
T08817
Symbol
Shank2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
117713868 (Shank2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
PI3K_rbd
SAM_4
SAM_CEP-1_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117713868
NCBI-ProteinID:
XP_034366278
LinkDB
All DBs
Position
1:110479731..110860703
Genome browser
AA seq
1848 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDYSVGSESDSSKEETIYDTIRATTEKPSGVKMEELQGNTLVIR
VVIQDLQQTKCIRFNPDATVWVAKQRILCTLNQGLKDVLNYGLFQPASNGRDGKFLDEER
LLREYPQPMGQGVPSLEFRYKKRVYKQSNLDEKQLARLHTKTNLKKFMDHTQHRSVEKLV
KLLDRGLDPNFHDLETGETPLTLAAQLDDSMEVIKALRNGGAHLDFRSRDGMTALHKAAR
MRNQVALKTLLELGASPDYKDSYGLTPLYHTAIVGGDPYCCELLLHEHASVCCKDENGWH
EIHQACRYGHVQHLEHLLFYGADMSAQNASGNTALHICALYNQGSCARALLFRGGNKELK
NYNSQTPFQVAIIAGNFELAEYIKNHKETDIVPFREAPAYSNRRRRPPNTLAAPRVLLRS
NSDNNLNAGAPEWAVCSAATSHRSLSPQLLQQTPSKPDGATKSLGSYAPGPRSRSPSLNR
LGGTGEDGKRPQPHWHVGSPFTPGANKDSLSTFEYPGPRRKLYSAVPGRLFVAIKPYQPQ
VDGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPRDSQAETRADRSK
KLFRHYTVGSYDSFDAASDCIIEDKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFP
ALQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKVVTVT
RNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTAELEELVDKASVRKKKDKPEEIVPASK
PSRTAENVAIESRVATIKQRPTSRCFPATSDVNSVYERQGIAVMTPTVPGSPKGPFLGLP
RGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPP
PSPTTYNCPRSPTPRVYGTIKPAFNQNPIAKVPPATRSDTVATMMREKGIFYRRELDRFS
LDSEDVYSRSPVPQAAFRTKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVE
DSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQATEPGQLRPDDSLTVSSPFAAA
IAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAPRMQPSTFPEEGGFGDEDETEQP
LLPTPGAAPRELENHFLGGGEAGAQGEAGGPLSSTSKAKGPESGLAAPLKSSSPASPENY
VHPLTGRLLDPSSPLALALSARDRAMQESQQGHKGEAPKADLNKPLYIDTKMRPSVESSF
PPVTRQNTRGPLRRQETENKYETDLGKDRRADDKKNMLINIVDTAQQKSAGLLMVHTVDA
PMAGPPLEEEEDREEGDTKPDHSPSTVPEGVPKTEGALQISAAPEPAAAPGRTIVAAGSV
EEAVILPFRIPPPPLASVDLDEDFLFTEPLPPPLEFANSFDIPDDPAASVPALADLVKQK
KNDTPQPPSLNSSQPANSADSKKPAGISNCLPSSFLPPPESFDAVTDSGIEEVDSRSSSD
HHLETTSTISTVSSISTLSSEGGESMDTCTVYADGQAFVVDKPPVPPKPKMKPIVHKSNA
LYQDTLPEEDTDGFVIPPPAPPPPPGSAQAGVAKVIQPRTSKLWGDVPEVKSPILSGPKA
NVISELNSILQQMNRGKSVKPGEGLELPVGAKSANLAPRSPEVMSTVSGTRSTTVTFTVR
PGTSQPITLQSRPPDYDSRTSGPRRAPSPVVSPTELSKEILPTPPSAAAASPSPTLSDVF
SLPSQSPAGDLFGLNPAGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLG
EHKETFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcagccccacatccagtgaggacgagatggcccagagtttctctgactattct
gtgggctcggagtcagacagctccaaagaagagaccatctatgacacgatccgggccacc
acagagaagccaagcggggtaaagatggaggagctccagggcaataccctggtgattcga
gtggtcatccaagatctgcagcagacgaagtgcattcgatttaacccagatgccaccgtg
tgggtggccaagcagcggatactgtgcacgctgaaccaaggcctgaaggatgtactcaac
tatggactctttcagccagccagcaatgggcgtgacggcaagttcctggatgaggaacgg
ctcctgcgggaatacccacagcccatgggccagggtgtgccttccttggagtttcgctac
aagaagcgtgtgtacaagcagtccaacctggatgagaagcagctggccaggctccacacc
aagaccaatctgaagaagtttatggaccacactcagcatcgctcagtggagaagctggtc
aagctgctggacagaggcctggatcccaatttccatgacttggagactggagagacgccc
ctgaccttggctgcccaacttgatgactccatggaggtcatcaaagctctcagaaacggg
ggtgcacatttggacttccgctccagggatgggatgactgcccttcacaaggctgcccgg
atgaggaaccaggttgccctgaagaccctcctggagcttggtgcctccccagattacaag
gacagctatgggctcaccccactgtatcacacggccattgtggggggcgacccttactgc
tgtgagctgcttctccacgagcatgcctccgtgtgctgcaaggatgagaacggctggcat
gagatccaccaggcctgcaggtacggccatgtccagcatctggaacatctgcttttctat
ggcgcagacatgagtgcacagaacgcctcggggaacacagccctgcatatctgcgccctc
tacaatcagggcagctgtgccagagcgctgctgtttcggggcggaaacaaggaattgaaa
aactacaacagccagacaccatttcaggtggctataatagcggggaactttgaacttgcg
gagtacatcaagaaccacaaggaaacagacattgtgcccttccgagaggccccagcttat
tccaaccgcaggcggcggccccccaacacattggccgcccccagagttcttctgcgttcc
aatagtgacaacaacctcaatgctggtgcacctgaatgggctgtctgctccgcagccacc
tcccaccgaagcctctcaccccagctgctgcagcagacacccagcaaacctgatggagcc
acaaagagccttggaagctacgcccctgggccccgcagccgctccccctcactcaacagg
ctgggtggcactggtgaggatggcaagaggccacagccacattggcatgtggggtcgccc
ttcactcctggtgccaacaaggactccctctcgacctttgagtacccagggcccaggagg
aagctgtatagcgcggtgcctgggagactcttcgtcgccatcaagccataccaaccccaa
gtcgacggcgagatcccccttcaccgaggcgacagggtcaaagttctgagcatcggtgag
ggaggattctgggaaggcagtgcccgtggccacatcgggtggttcccagctgagtgtgtg
gaggaggtgcaatgtaaaccccgggacagccaggcagaaacccgtgcggaccgcagcaag
aagctctttcggcattacacagtgggctcctatgacagctttgatgctgccagtgactgc
attattgaggacaagacggtggtcctgcagaagaaagacaacgagggctttggatttgtg
ctccgaggggcaaaagctgatacccccattgaggaattcacacccacgccggcatttcca
gccctgcagtacctggagtccgtggatgaaggtggggtggcatggcaagccggactaagg
accggggacttcttgattgaggttaacaatgaaaatgtcgtcaaggtgggccacaggcag
gtggtgaacatgatccgccagggagggaatcacctcgtccttaaggtcgtcacggtgacc
aggaatctagaccctgatgatacggccagaaagaaagctcccccacctccaaagcgggct
ccaaccacggcactcaccctgcgttccaagtccatgacagcggagttggaggaactcgtg
gacaaagcctcagtccggaagaagaaggataaaccggaagagatagtcccagcctccaag
ccctctaggactgcagagaacgtggccatagaatccagggtggcgaccatcaagcagcgg
cccacaagccggtgcttcccagccacctctgatgtgaattccgtgtacgagcgccaaggg
attgctgtaatgacgcccacggtccctgggagcccgaaaggcccatttctgggcctccct
cgaggtacgatgcgaaggcagaaatccatagacagcagaatctttctatcagggataaca
gaggaagagcggcagtttctggctcccccaatgctgaagttcacccgaagcttgtccatg
ccagacacttctgaggacatcccccctccgccacagtctgtgcccccctctccccctccc
ccttcccccaccacatacaactgccccaggtccccgactccaagagtctatgggacaatt
aagcctgcgttcaatcagaaccccatcgccaaggtgcccccagccaccaggtctgacact
gtggccaccatgatgcgggaaaaggggatattctacaggagagagctggaccgcttttcc
ctggactcggaagacgtctacagccgcagccccgtgccacaggctgccttccgcaccaag
cggggacagatgcctgagaacccatactcagaggtgggaaagatagccagcaaggccgtc
tatgtccccgccaagccagccaggcggaagggcatgctggtaaagcagtccaatgtggag
gacagccctgagaagacatgctccatacccatccccaccatcatcgtcaaggaaccctcc
accagcagcagcggcaagagcagccagggaagcagcatggagatcgacccccaggctacg
gagcctggccagttgcggccagatgacagcctcaccgtcagcagcccctttgctgcagcc
attgccggggccgtgcgggaccgggagaagcgtctggaagccaggaggaattctccggcc
ttcctctccacagacctgggagatgaggatgtgggtctggggccacctgctccccggatg
cagccctccacgttccccgaggagggtgggtttggtgatgaagatgaaacggaacagccc
ctattgcctacccccggggcagcacccagggagctggagaaccacttcctaggtggtggt
gaggctggtgctcagggggaggctgggggacccctgagttccacatccaaagccaagggg
cctgagagtggcctagcagcccccctcaagagcagcagcccagccagccctgagaattac
gtgcacccactcacagggcggctgctcgaccccagctccccgctggccctggccctctct
gccagggaccgagccatgcaggagtcccagcaggggcacaagggggaggcccccaaggct
gacctcaacaagcctctctacattgataccaaaatgcggcccagtgtggagtccagtttt
cctccggtcaccagacagaacaccaggggtcccctgcgacggcaagagacagagaacaag
tacgagaccgacctgggcaaggaccggagggctgatgacaagaagaacatgctgatcaac
atcgtggacactgcccagcagaagtcagccggcctactgatggtgcacacggtggatgct
cccatggcggggccacccctggaggaagaggaggacagagaggaaggggatacaaagcca
gaccactcaccctccacagtgccagaaggcgttcccaaaaccgaaggtgctttacagatc
tccgctgccccggagcccgccgccgcgcccggcaggaccatcgtggcagcgggctccgtg
gaagaggcggtgattctgccattccgaatcccccctccccctctggcgtccgtggacttg
gatgaggactttcttttcacagaaccattgcctcctcccctggaattcgccaatagtttt
gatatccctgatgacccggcagcttcagttcctgctctggctgacctggtcaagcagaag
aaaaacgacacccctcagcccccttcgttgaactccagccaaccagccaactccgcagac
agtaagaagccagccggcatctcaaactgtctgccctcctcattcctgccgccccccgaa
agcttcgacgcggtcaccgattcggggatcgaggaggtggacagccggagtagcagcgac
caccacctggagacaaccagcaccatctccacagtgtccagcatctccacgctgtcctca
gagggcggggagagcatggacacgtgcacagtctatgcagacgggcaagcctttgtggtt
gacaagcccccagtacctccaaagccaaaaatgaagcccatcgttcacaaaagcaacgca
ctttaccaagacaccctcccagaagaggacacagatggctttgtgatccccccacctgca
cccccgcccccgccgggcagtgcccaggccggcgtggcgaaggtcatccagccaaggacc
tccaagttgtggggtgacgttccagaggtcaaaagcccaattctctcaggcccaaaggca
aatgtcattagtgagctaaactccatcctgcagcagatgaacagggggaagtcggtcaag
cctggggaagggctggagctgccagtgggagccaagtcggccaacctcgctccaagaagc
ccggaggtcatgagcactgtctcaggtacacggagcacgacggtcaccttcactgtccgc
cctggcacctcccagcccatcaccctgcagagccggccccccgactatgatagcaggacc
tcaggaccgagacgtgccccaagccctgtggtttcaccaacggaattgagcaaagagatt
ctgcccacccctccgtctgctgccgcagcctctccctcccccacactctcagatgtcttt
agccttccaagccagtcccctgcaggggacctgtttggcttgaacccagcaggacgcagc
aggtcaccatctccttcaatattgcaacagccaatctcaaataagccttttacaactaag
cctgtccacctgtggacgaaaccagacgtggcagactggctagaaagtctgaacttgggt
gaacacaaggagacgttcatggacaatgagattgacggcagccacctgccaaacctccag
aaggaagacttgatagatcttggggtgactcgagttgggcataggatgaacatagaaagg
gctttgaaacagctgctggacagataa
DBGET
integrated database retrieval system