Arvicanthis niloticus (African grass rat): 117713937
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Entry
117713937 CDS
T08817
Name
(RefSeq) contactin-associated protein-like 3
KO
K24337
contactin associated protein-like 3/4
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117713937
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
117713937
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
Motif
Other DBs
NCBI-GeneID:
117713937
NCBI-ProteinID:
XP_034366379
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All DBs
Position
8:393799..542872
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AA seq
1291 aa
AA seq
DB search
MAWVKGTLLNVLLLLLLRLLLLSAQTLPLVAAGDPHNCDVPLASSLPQLSFSSSSQLSSS
HGPGFARLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMF
SDGGRNWKQYHQEESISGFSGNTNADSVVQYSLQPSFHTRFLRFLPLAWNPKGRIGMRIE
VYGCSYKSEVVYFDGQSSLLYKFDNGAIRPIREVISLKFKAMQNSGIIFHKKGQHGTHIV
LELIKGKLVVYLNSGNGNLPPVGSIMNFTLGSLLDDLHWHSVLIELQNMHVNFTLDKHMH
HVHVNKESSYLDLNFEISFGEILMPGGHFLTFPHKSFHGCLENIYFNGVNIIKLAKKHEP
QILIKGNVSFTCPQPQTVPVTFLSSGSYLALPGSLREDKMSLAFELRTWNKEGYVFFSQL
GHGSGSLVLFLKSGKLILSLSEPGQPLKNITTGVVLNDGLWHSVSLSAQGSYLSLTVDGD
SSAQTLSVWIHSGNTYYFGGCPDNSSSFGCDSSFGGFQGCLRLISIGDKVVDPIAVQQGV
LGGFSDLQIDSCGIIDRCLPSYCEHGSRCTQSWDTFSCDCEGTGYTGTTCHSSIYEQSCE
AHRHRGSPSGLYYIDVDGSGPLMPFLVYCNMTADTAWTVVHHGGPDVVTVRGGPEGHMRS
AAFSYAASAAQLHAVVDVADHCEQQVDLQCRTSASSNTEDGTSLSWWVGRTNETYTYWGG
SLPDPQKCTCGLEGTCIDSQYHCNCDADLSEWTSGTIVLSHKEHLPVTEMVVTDTGRPHS
EAAYTLGPLLCQGDKSFWNSASFNTEASYLHFPTFHGELTADVHFLFKTTISSGVFMENL
GITDFIRIELRAPTEVTFSFDVGNGPCELTIQSPTPFNDNRWHQVRAERNVKGAALQVDQ
LPQKTQPTLADGHVRLQLNSQLFIGGTASRQKGFLGCIRSLQVNGMTLDLEGRAVMTPGV
EPGCSGHCSSYGHLCRNGGKCLEKHRGIACDCAFSAYDGPLCSHEISAYFEMGSSVTYNF
QEHSPLSENTSSLASSLHGDVILSRETITLSFRTTQTPCLLLYVSSFYEEYLSVILANNG
SLQVRYKLDRHRNADAFNFDLRNLADGHFHQLMINREEAVVSVEVNQSTKRQVILSSGTE
FNAVKSLILGKVLEPLDTDPEMQQAAAQGFTGCLSSVRFGLEVPLKAALNQDLARVTIQG
GVAAAAHCAEGPGSAVRKLSPVPSLGAGHSGSAEDRRPLSNTNRSDPGVIGGITAVVIFI
LLCVSAIAIRVHQQKRLRQKNESTLSKTEEC
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggtcaaaggaacattgctgaatgttttactgctgctgctgctgcggctgctg
ctgctgtctgctcagaccctgcccctagtagcagcgggagatccacacaattgtgatgtt
cctttggcttcttctttgccccagttatccttcagcagctcctcacagctgtccagcagc
catggccctggctttgcaagactaaaccgaagagatggagctggtggatggacaccactt
gtgtcaaataagtatcagtggctgcagattgaccttggagaacgaatggaggtcactgct
gtggccacccaggggggatacgggagttctgactgggtgaccagctacctcctgatgttc
agtgatggtggaaggaactggaagcagtatcatcaagaagaaagcatctcgggattttca
ggaaacacaaacgcagacagtgtggtacagtatagtctccagccctccttccacaccagg
ttcctgcgctttctccccttagcctggaaccccaagggcaggattggaatgcggatagaa
gtatatgggtgttcatacaaatctgaggtggtttattttgatggacaaagttctctgctc
tacaaatttgataacggagccataagaccaataagagaggttatttctttgaaatttaaa
gccatgcagaacagcgggattatattccataaaaaaggacaacatgggactcacattgtt
ttggagttaatcaaaggaaagcttgttgtttatcttaattcaggcaatggaaacctgccc
cctgttggttctatcatgaacttcaccctaggcagccttctggatgacctgcactggcat
tctgtgctcattgagctccaaaacatgcatgtgaacttcaccctggacaaacacatgcat
catgtacatgtgaacaaggaatccagttacttggatcttaattttgagatcagctttgga
gaaattctgatgcctggagggcatttcctgacattcccacataaaagttttcatggatgt
ttagaaaatatttattttaatggagtcaatattattaaattagccaagaaacacgaacca
caaatcttaattaagggaaatgtgtccttcacatgcccacaaccacagacagttccagtg
acttttctgagttctgggagttacctggctttgccaggcagtttaagggaagataaaatg
tcccttgcttttgagctccgaacgtggaacaaggaaggatatgtgttttttagccaactg
gggcatggttcaggaagtttggtcctgtttcttaagagtggaaaactcattctgagcctt
tctgagccaggtcaacccttgaagaacatcacgacaggtgtcgtactgaatgacgggctg
tggcactcagtttctttgtctgctcagggcagctacctaagtctcacggtagatggagac
tcctctgctcagactctgtctgtatggattcattcaggcaatacttactattttggaggt
tgtcctgacaacagctctagctttggatgtgacagttcttttggaggcttccagggctgc
ctgaggctcatctccattggtgacaaagtggtagatccaattgcagtacagcagggagtg
ctggggggcttcagtgacctccagatagactcctgtggcatcatagaccggtgtttgccc
agctactgtgagcatgggagtagatgtacccagtcatgggataccttctcctgtgactgt
gaaggcacgggctacactggaacaacctgccattcctccatctatgaacagtcttgtgaa
gcccacaggcacagagggagcccttctggactttactacattgatgtagatggaagtgga
ccactgatgccgtttcttgtgtactgcaatatgacagcagacacagcatggactgttgtt
catcatggagggcccgatgtagtgacggtcagaggtggcccagaaggacacatgcgttct
gcagccttctcctatgctgccagtgcagcacagctgcatgctgtggtagatgttgcagat
cactgtgagcagcaggtggacctacaatgcaggacctcagcatcctcaaatacagaagat
ggaacctcactgagctggtgggttggaagaaccaatgaaacatacacttactggggaggt
tctctgcctgatcctcaaaagtgtacttgtggattagaagggacctgcattgattctcaa
taccactgcaactgtgatgctgacctcagtgaatggaccagtggcacaatagtcctttct
cataaggagcacctgcctgtcactgagatggtggtgacagacacaggccgaccacactct
gaagctgcttatacactggggcctttgctttgccagggagacaagtcattttggaattca
gcttcctttaacactgaggcttcataccttcatttcccaaccttccatggagagctcact
gctgatgtgcacttcctttttaagaccaccatttcctctggtgtattcatggagaatctg
ggaatcactgacttcatcagaatagagctgcgtgctcccacagaagtgaccttttctttt
gatgttgggaatggaccttgtgagctcactatacagtcaccaactccctttaatgacaac
cggtggcatcaagtaagggcagaaaggaatgttaagggagcggctctccaggtagatcag
ctccctcagaagacacagcccactcttgctgatggacatgttcgactacaactcaacagc
cagctcttcattggggggacggccagcaggcagaagggcttcctgggatgtatccggtcc
cttcaggtgaatggaatgacactggacttagagggaagggctgtaatgacaccaggagtg
gagccaggatgctcaggtcactgcagcagctatggacacctgtgtcgcaatggaggaaag
tgtctagagaaacacagagggattgcttgtgactgtgccttctctgcctacgatggacca
ctgtgctcacatgaaatttctgcatattttgaaatgggttcttcagtgacctataatttc
caagaacattcccccctgagtgaaaacaccagctccctggcttcttcattgcatggggat
gtcatactgtccagagaaaccatcacactgagcttccgaaccacacagacaccatgctta
ttgctttatgtgagctctttctatgaggaatacctttcagttatcctggccaacaatgga
agtttacaggtgaggtacaagctggacagacatcggaatgcagatgctttcaactttgac
cttagaaacttagcagacggtcactttcaccagctgatgattaacagagaagaagcagta
gtctctgtagaggttaaccagagtacaaagagacaagtcatcttgtcctcagggactgaa
ttcaatgctgtcaaatcactcatattgggaaaggttttagaaccgctggatactgaccct
gaaatgcagcaggccgctgctcagggcttcacaggctgcctctcttctgtgagatttggc
ttggaagtcccactgaaggctgcactgaaccaggacctggccagagtcactattcaaggc
ggtgtggctgctgcagctcattgtgcagagggccctggctctgcagtgagaaaactgtcg
ccagtgccctctctgggtgcaggtcattctggatccgcagaagatagacggcctctttct
aacacaaacaggagtgaccctggggtcatcggaggaataacagcagttgtgatatttatt
ttgctctgtgtgtctgccatagccatacgggttcatcaacagaaaagattacgccaaaaa
aatgagtcaacactctcaaaaactgaagagtgctaa
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