Arvicanthis niloticus (African grass rat): 117713959
Help
Entry
117713959 CDS
T08817
Symbol
Tmc7
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117713959 (Tmc7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117713959 (Tmc7)
03037 Cilium and associated proteins [BR:
anu03037
]
117713959 (Tmc7)
Transporters [BR:
anu02000
]
Other transporters
Pores ion channels [TC:
1
]
117713959 (Tmc7)
Cilium and associated proteins [BR:
anu03037
]
Other cilia and associated proteins
Stereociliary proteins
117713959 (Tmc7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF2207_C
DUF8218
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
117713959
NCBI-ProteinID:
XP_034366415
LinkDB
All DBs
Position
1:complement(85975580..86027212)
Genome browser
AA seq
726 aa
AA seq
DB search
MSEGSAGDPGHGSSRQRAVHPENLSVGSNYFSPPVNFLQELPSYRSVARRRTNILSRDKQ
SGTLLKPTDSFSSQLDGGITENLNSQSIRKYALNISEKRRLRDIQETQMKYLSEWDQWKR
YSSKSWKRFLEKAREMTTHLELWRKDIRSIEGKFGTGIQSYFSFLRFLVVLNLVIFLIIF
MLVLLPIILTKYKITNSTFVLIPFKDMDIQCTLYPISSSGLIYFYSYIIDLLSGTGFLEE
TSLFYGHYTIDGVKFQNFTYDLPLAYLVSTIAYLALSLLWIVKRSVEGFKINLIRSEEHF
QSYCNKIFAGWDFCITNRSMAELKHSSLRYELRADLEEERIRQKIAERTSEETIRIYSLR
LFLNCIVLAVLAACFYAIYLATTFSQEHMKKEIDKMVFGENLLILYLPSIVITLANFITP
IIFAKIIHYEDYSPGFEIRLTILRCVFMRLATICVLVFTLGSKITSCGDSTCELCGYNQK
LYPCWETQVGQEMYKLMIFDFIIILAVTLFVDFPRKLLVTYCASSKLIQCWGQQEFAIPD
NVLGIVYGQTICWIGAFFSPLLPAIATLKFVIIFYVKELSLLYTCRPSPRQFRASNSNFF
FLLVLLIGLCLAIIPLTISMARIPSSKACGPFTNFNTTWEVIPQTVSTFPSSLQTLIHGV
TSEAFAVPFFMIICLVMFYFIALAGAHKRVVVQLREQLSLESRDKRYLIQKLTEAQRDVR
SQPASS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagggcagcgcgggcgacccgggccatgggtccagcaggcagcgggccgtacac
ccagagaacctgtctgtaggttccaactacttctctccgcctgtgaacttccttcaagag
ctgccaagctatcggtcagtagcacgtaggaggacaaacatcctctctcgggacaagcag
agtggcaccctgctgaagccgacagactctttcagttcccagctggatggaggaatcaca
gaaaacctcaacagccaatccatccgcaagtatgcgctgaacatctctgagaagcggaga
ctaagggacatccaggaaacccagatgaagtatttatcagagtgggaccagtggaaacgg
tacagcagcaagtcctggaagaggttcctagagaaagcgcgagagatgacgacccacctg
gaactgtggcgcaaagacatccgcagcattgaagggaagtttggcacggggatccagtcc
tacttctccttcctgcggttcctggtggtgctgaacctggtgatattcctgatcatcttc
atgttggttttgctcccaatcatactgaccaagtacaagattaccaacagcactttcgtg
ctcattccgttcaaagacatggatattcagtgcacactgtatccaataagtagctctggg
ctcatttacttctacagttacatcatagacctgctgtctggcacgggattcttggaggag
accagccttttttatggacactataccatcgatggtgtaaaattccagaacttcacatat
gatctgcccctggcttacttggtaagcacgatcgcctacctggccctgagccttctttgg
atagtgaaaaggtcggtggaagggttcaagatcaacctgattcggagtgaggagcacttt
cagagttactgtaacaagatctttgctggctgggacttctgtatcaccaaccgcagcatg
gccgaactgaagcacagcagcttgcggtatgagctcagagcagatctggaagaagagaga
atccgacagaaaatagcagaaaggacttcagaggaaaccatccgcatttactctttgagg
ctgtttctgaactgcattgtgctggctgtgctagctgcatgcttttatgcaatctaccta
gcaactactttctcacaagaacacatgaaaaaagaaattgacaagatggtttttggggag
aacctgctgatattgtacctcccatccattgtgattacattggccaatttcatcacccca
atcatctttgccaagatcatccactacgaggattactcaccaggctttgagatccgcctg
acgattcttaggtgtgtctttatgcggctggccaccatctgtgtgctggtgttcacgctg
ggctccaagattacatcctgtggtgacagcacgtgtgaactctgcggctataatcagaaa
ctctacccgtgctgggagactcaggtgggacaggagatgtacaagctgatgatcttcgac
ttcatcatcatcctggccgtgacgctgtttgtggatttccctaggaagctcctggtgacc
tactgtgcctcctcaaagctgatccagtgctgggggcagcaggaattcgccatcccggac
aatgtcctgggcatcgtgtacgggcagaccatctgctggattggcgccttcttctcccca
ctcctccctgccatcgccaccttgaaatttgttatcatcttttatgtgaaggagttgagt
cttctctacacctgcagaccctccccacgccagttcagagcatccaactctaacttcttc
ttcctgctggtgctgctgattgggctgtgcttagcgatcatacctctgaccatcagcatg
gctcgcatcccttcctcaaaagcctgtggcccatttaccaacttcaacaccacctgggag
gttatcccccagactgtgagcaccttccccagctccctgcagaccctgatccatggcgtt
acatcagaagcatttgcagtgcctttcttcatgatcatctgcctcgtcatgttctacttc
attgcgctggctggggcacacaagcgggtggttgtacagctccgagagcagctgtccctg
gagagtcgtgacaagcgttatcttatccagaaactaacggaagctcagagggatgtgcgg
agccagccggcgtcatcgtga
DBGET
integrated database retrieval system
