Arvicanthis niloticus (African grass rat): 117713960
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Entry
117713960 CDS
T08817
Symbol
Hnrnpk
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
anu05203
Viral carcinogenesis
anu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117713960 (Hnrnpk)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
117713960 (Hnrnpk)
05203 Viral carcinogenesis
117713960 (Hnrnpk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117713960 (Hnrnpk)
Spliceosome [BR:
anu03041
]
Common components
Common spliceosomal components
hnRNP proteins
117713960 (Hnrnpk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
DJ-1_PfpI
Bflower
Motif
Other DBs
NCBI-GeneID:
117713960
NCBI-ProteinID:
XP_034366412
LinkDB
All DBs
Position
8:5672963..5684329
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AA seq
465 aa
AA seq
DB search
METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
GSRARNLPLPPPPPPRGGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQM
AYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA
SIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaacagccagaagaaaccttccccaacaccgaaaccaatggtgaatttggt
aaacgcccagcagaagacatggaagaggaacaagcctttaaaagatctagaaatactgat
gagatggttgaattgcgcattttgcttcagagcaagaatgctggggcagtgattggaaaa
ggaggcaagaatattaaggctctccgtacagactacaatgccagtgtttcagtcccagac
agcagtggccccgagcgcatactgagtatcagtgctgatattgagacgattggagaaatt
ctgaagaaaatcatccctaccttggaagagggcctgcagttgccatcacccactgcaacc
agccagctcccgctcgaatctgatgctgtggaatgcttaaattaccaacattataaagga
agtgactttgactgcgagttgagactgttgattcatcagagtctggcaggaggaattatt
ggtgttaaaggtgctaaaatcaaagaacttcgagaaaacactcagacaacaatcaagctt
ttccaggagtgctgccctcattctactgacagagtcgttcttattggaggaaaacctgat
cgggttgtagaatgcatcaagatcatccttgaccttatatctgagtctcccatcaaagga
cgtgcacaaccttatgatcccaacttttatgatgaaacctatgattatggtggttttaca
atgatgttcgatgaccgccgaggacggcctgtgggatttcccatgcggggaagaggtggt
tttgacagaatgcctcctggtcggggtggtcggcccatgcctccttctagaagagattat
gatgatatgagccctcgtcgaggacctccaccaccacctcctggtcggggtggccggggt
ggcagccgtgccaggaatcttcctcttcctccaccacctccacccagaggaggaggagat
ctaatggcttatgacagaagaggaaggcctggagaccgctatgatggcatggttgggttc
agtgctgatgaaacttgggactctgcaattgacacatggagcccatcagaatggcaaatg
gcttatgaaccacagggtggttctggatatgattattcttatgcagggggtcgtggctca
tacggtgatcttggtggacctattatcactacacaagtaactattcccaaagatttggct
ggatctattattggcaaaggtggtcagcggattaaacaaattcgtcatgagtctggagca
tcaatcaaaatcgatgaacctttagagggatctgaagatcggatcattaccattacagga
acacaggaccagatacagaacgcacagtatttgctgcagaacagtgtgaagcagtatgca
gatgttgaaggattctaa
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