Arvicanthis niloticus (African grass rat): 117714021
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Entry
117714021 CDS
T08817
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03082
ATP-dependent chromatin remodeling
anu04217
Necroptosis
anu04613
Neutrophil extracellular trap formation
anu05034
Alcoholism
anu05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117714021
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117714021
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
117714021
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
117714021
09165 Substance dependence
05034 Alcoholism
117714021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117714021
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117714021
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
117714021
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117714021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
DUF1764
Clp_N
Motif
Other DBs
NCBI-GeneID:
117714021
NCBI-ProteinID:
XP_034366508
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All DBs
Position
8:7926649..7987261
Genome browser
AA seq
372 aa
AA seq
DB search
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKPVAKKTGGKKGSRKSKKKQGEVSKAASADSTTEGTPT
DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
ADDRKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagccgtggtgggaagaagaaatccaccaagacctcccggtcagccaaggctggg
gtcatcttccctgtgggacggatgctgcggtacatcaagaaaggccaccctaagtatagg
atcggagtgggggcacctgtgtacatggctgctgtcctggaatacctgacggctgagatc
ctggagctggctggcaatgcagcaagagacaacaagaagggacgggtcactccacggcac
atcctgttagctgtggccaacgatgaagagctaaaccagctgctaaaaggagtcaccata
gccagcgggggtgtgttgccgaatatccatcctgagctgctggcaaagaagcgaggatcc
aaggggaaactggaagccatcattacgcctccaccagccaaaaaggccaagtctccgtcc
cagaagaagccagtggctaagaaaacaggaggcaagaaagggtcccggaagtctaagaag
aagcagggagaagtcagcaaggctgccagtgcggacagcacgacggagggcacacctaca
gatggctttaccgtcctctccaccaagagcctcttcctcggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggctttgaggtggaggccataatcaatcctaccaat
gctgacattgaccttaaagatgacctaggaaacacactggagaagaagggtggcaaggag
tttgtagaagctgttctggaacttcgaaaaaagaacgggcccttggaagtagctggagct
gctgttagtgcaggccatggcctgcctgccaagtttgtgatccactgtaatagtccggtc
tggggtgcagacaaatgtgaagaacttctagaaaagacggtgaaaaactgcttggctcta
gctgatgacagaaagctgaagtccatcgccttcccgtccattggcagcggcaggaacggg
ttcccgaagcagacggcagcccagctcatcctgaaggccatctccagctactttgtgtcc
actatgtcctcctccatcaaaactgtgtactttgtgctttttgacagtgagagcataggc
atctatgtgcaggaaatggccaagctggatgccaactag
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