Arvicanthis niloticus (African grass rat): 117714047
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Entry
117714047 CDS
T08817
Symbol
Trim27
Name
(RefSeq) zinc finger protein RFP
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117714047 (Trim27)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117714047 (Trim27)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117714047 (Trim27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-Tbcl_FmdE
RING_XB3-XBAT31
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
117714047
NCBI-ProteinID:
XP_034366549
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All DBs
Position
8:complement(40584509..40597339)
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AA seq
513 aa
AA seq
DB search
MASGSVAECLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRNMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEQDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNRLEHLRRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSGLIAQLEEKQ
QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagtgcctgcagcaggagaccacctgccccgtgtgtctt
cagtactttgtggagcccatgatgctcgactgcggccacaacatctgttgcgcgtgcctg
gcccgctgctggggtgccgcggagactaacgtgtcgtgcccgcagtgccgggagaccttc
ccgcagcgcaacatgcggcccaaccggcacctggccaacgtgacccagctggtgaagcag
ctgcgcaccgagcggccgtcgggaccgggcggcgagatgggcgtgtgcgagaagcaccgc
gagcctctgaagctgtactgcgagcaggaccagatgcccatctgcgtggtgtgcgaccgc
tcgcgcgagcaccgcggccacagcgtgctgccgctggaggaggctgtggaaggcttcaag
gagcaaatccagaatcggctggagcacctaagaagagtgaaagacttgaagaagaggcgg
cgggcacagggggagcaggcacgagctgagctcttgagcctgacccagatggagagggag
aaaatcgtttgggagtttgagcagctctatcactctttgaaagaacatgagtatcgactg
ttggctcgcctcgaggagctcgacttggccatctataacagcatcaacggtgccatcact
cagttctcctgtaacatctcccacctcagtggcctgattgcccaactggaggagaagcag
cagcagcccacaagggagctcttgcaggacattggcgacacactgagcagggctgaaaga
atcaggatccctgagccctggatcacacctccagatctacaagagaagatccatattttt
gcccaaaaatgtctgtttttgacagaaagtctaaaacagttcacagaaaaaatgcaatca
gatatggagaagatccaagagttgagagaggctcagttatactcagtggatgtgaccctg
gacccagacacagcctaccccagcttgattctttctgataatcttcggcaagtacggtac
agttacctccagcaggatcttccagacaaccctgagcggttcaatctgtttccctgtgtc
ttgggctctccgtgtttcatcgctgggagacattattgggaggtagaggtgggagataaa
gccaagtggaccataggtgtctgtgaagactcggtgtgcagaaaaggtggggtgacctca
gccccccagaatggattctgggcagtgtcattgtggtatgggaaagaatattgggctctt
acatccccaatgactgcactccccctgcggacccctctccagagggtagggattttcttg
gactatgatgctggtgaggtttccttctacaatgtgacagagagatgccatacctttact
ttctctcatgctaccttctgtggtccggtccggccctacttcagcctcagttactcggga
gggaagagtgcagctcctttgatcatctgccctatgagtgggatcgatgggttttctggc
catgttgggaatcatggtcattccatggagacctctccttga
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