Arvicanthis niloticus (African grass rat): 117714283
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Entry
117714283 CDS
T08817
Symbol
Fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117714283 (Fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117714283 (Fancc)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
117714283 (Fancc)
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Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
117714283
NCBI-ProteinID:
XP_034366884
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Position
8:1781453..1906645
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AA seq
559 aa
AA seq
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MARESADLASDCQFWLQKLSAWEQASSEETQQDTCLHLSRFQEFLRQMYEILKEMDSDAI
LERFPTIGQLLAKTCWNPFILAYDESQKIVIWCLCCLMTKEPRSSTESGRNSWIRGLLSH
VLSTFRFDMKEVCLFTRSLGYESIDYYPSLLKNMVLSLVSELRESHLNGLNTQSRRMAPE
RMMSLSRVCVPLVTLPDMEPLVEALLTYHGHEPQEVLTPEFFEAVNEAFLLKKIVLPMSS
VVSLWFRHLPSLEKATLHLFEKLFSSKRNSLRKMECCIKESLLPQAACQPAIFRIVDEMF
RFVLLETDGAPEVLAALQVFTSCLVEALKKENEQLKFALRAYFPYGAPCLTAALSQHPEA
IPQGHGLQPLLHISQLLREAVEDCTYGSQRNPFESWFLFVHFGGWVDLAVEELLLRQEAE
PPANLLWLLVFYYSPQDGSQQREQSMVKLKVLVNHFLMLLRSGPLSAINLQEAAESASAD
PRPPVCEQLVRRLLLSLLLWTPEGHAIVWEAVTHMARTDAVTHEIIGFLDQTLYRSHHLC
VEASRKLARKLLKELQAQV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggagtctgcagaccttgcttctgactgtcagttttggctgcagaagctttct
gcatgggaacaggcctcttctgaggaaacccagcaggacacttgtcttcacctgtcccgg
ttccaggagttcctgaggcagatgtatgaaatcttgaaggagatggattctgatgcaatc
ctggaaaggttccccacaattggtcaactgttggcaaaaacttgttggaatcctttcatc
ttagcatatgatgaaagccaaaaaattgtaatatggtgcttatgttgtctgatgactaaa
gaaccacggtcttctacagagtcaggacgtaactcatggatccggggtttgttatctcat
gtactttccacattcagattcgacatgaaagaagtttgtctttttaccagaagtcttgga
tatgagtctattgattactatcctagtttgcttaaaaatatggttttgtcgttagtgtct
gagctcagagagagtcatcttaatggattgaacacgcaaagtcgtaggatggctcctgag
cgcatgatgtccctgtcacgagtctgtgtccctcttgttactctgcctgatatggaaccc
ctggtagaggctctactcacctaccatggacatgagccccaggaggtcctcactcctgag
ttctttgaagctgtaaacgaggccttcttattgaaaaaaattgttctgcccatgtcctct
gtggtcagcctttggtttcggcatctccccagtcttgaaaaagcaacactgcatcttttt
gaaaagctgttctccagcaagagaaattccctgagaaagatggagtgctgtataaaagag
tcattactgcctcaagcagcctgccagcctgccatcttcagaattgttgatgaaatgttc
aggtttgtgctactggaaactgatggagccccagaagtactagctgctcttcaggttttc
acatcatgcttggtagaagctctgaaaaaagaaaacgagcagctgaagtttgccctcagg
gcctactttccctatggtgctccgtgtctcactgcagcgctgtcccagcaccctgaagct
atcccacagggacatgggctccagcctctgctgcacatttctcaactcctcagagaagca
gttgaagactgtacttatgggtctcagcgaaatcccttcgagagctggtttttgtttgtt
cactttggaggatgggttgatctggctgtggaggagttgctgctgaggcaggaagctgag
cctcccgcaaacctgctgtggctcttggtcttctattatagcccacaggatgggagtcag
cagagagagcagagcatggtgaagctgaaggtattagtcaaccatttcctgatgttgctc
agaagtggccccctctcagctatcaatctgcaagaagcagctgagagtgccagtgcagac
cccagaccacctgtatgtgaacagctggtcagacgccttcttcttagtctcttgctctgg
accccggaaggccatgcgattgtctgggaagctgtcacccatatggcccgcacggatgct
gtaacccatgagattattggctttcttgaccagaccttgtacagatcgcaccatctttgt
gttgaagcctcaagaaaactggccagaaagctcctaaaggaactgcaagctcaggtctag
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