Arvicanthis niloticus (African grass rat): 117714290
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Entry
117714290 CDS
T08817
Symbol
Irf4
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
117714290 (Irf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117714290 (Irf4)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117714290 (Irf4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
TadF
Motif
Other DBs
NCBI-GeneID:
117714290
NCBI-ProteinID:
XP_034366894
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All DBs
Position
8:complement(31708040..31721260)
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AA seq
450 aa
AA seq
DB search
MNLETGSRGSEFGMSAVSCGNGKLRQWLIDQIDSGKYPGLVWENEEKSVFRIPWKHAGKQ
DYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISD
PYKVYRIVPEGSKKGAKQLTLEDTQMAMGHPYPMTAPYGSLPAQQVHNYMMPPHDRSWRD
YAPDQSHPEIPYQCPVTFGPRGHHWQGPSCENGCQVTGTFYACAPPESQAPGIPIEPSIR
SAEALALSDCRLHICLYYRDILVKELTTSSPEGCRISHGHTYDVSNLDQVLFPYPDDNGQ
RKNIEKLLSHLERGLVLWMAPDGLYAKRLCQSRIYWDGPLALCSDRPNKLERDQTCKLFD
TQQFLSELQVFAHHGRPAPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN
SGHFLRGYELPEHISTPDYHRSLRHSSIQE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggagacgggcagccggggctcagagttcggcatgagcgcagtgagctgcggc
aacgggaaactccgacagtggttgatcgaccagatcgacagcggcaagtaccccgggctg
gtgtgggagaacgaggagaagagcgtcttccgcatcccgtggaaacacgcgggcaagcag
gactacaatcgtgaggaggacgccgccctcttcaaggcttgggcactatttaaaggcaag
ttccgggaagggatcgacaaaccagatccccctacttggaagacgagattacgatgtgct
ctgaacaagagtaatgattttgaggagctggtagagaggagccagctggatatctctgac
ccatacaaggtgtacaggattgttccagagggatccaaaaaaggagccaaacagctcact
ctggaagacacacagatggctatgggccacccctaccccatgacagcaccttatggctct
ctgccagcccagcaggttcataactacatgatgccaccccatgacaggagctggagggat
tatgcccctgaccagtcacacccagaaatcccatatcaatgtcctgtgacgtttggccca
cgcggccaccactggcaaggcccatcttgtgaaaatggttgccaggtgacaggaaccttt
tatgcttgtgccccacctgagtcccaggctcccggaatccccattgagccaagcataagg
tctgctgaagccttggcgctctcagactgccggctgcatatctgcctatattaccgggac
atcctcgtgaaggagctgaccacatccagccccgagggctgccggatctctcacggacat
acctacgatgttagcaacctggaccaggtcctgttcccctacccggacgacaatgggcag
aggaagaacattgagaagttgctgagccacctggagaggggactggtcctctggatggcc
ccagatgggctttatgccaaaagactctgccagagcaggatctactgggatgggcccctg
gcgttgtgcagtgatcggcccaacaaactagaaagagaccagacttgcaagctctttgac
acacagcagtttctatcagagctgcaagtgtttgctcaccacggccggccagcaccgaga
ttccaggtgactctgtgctttggtgaggagtttccagaccctcagagacaaaggaagctc
atcacagctcatgtagaacctctgctagccagacaactgtattactttgctcaacaaaac
agtggacatttcctgaggggctacgagttacctgaacacattagcactccagattaccac
cgatccctccgtcattcttccatccaagagtga
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