Arvicanthis niloticus (African grass rat): 117714358
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Entry
117714358 CDS
T08817
Symbol
Kdm1b
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117714358 (Kdm1b)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117714358 (Kdm1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox
Pyr_redox_2
SWIRM
Thi4
DAO
HI0933_like
Pyr_redox_3
FAD_oxidored
FAD_binding_3
FAD_binding_2
Lycopene_cycl
NAD_binding_9
GIDA
2-Hacid_dh_C
NAD_binding_7
AlaDh_PNT_C
Attractin
YjeF_N
Shikimate_DH
Glu_dehyd_C
Motif
Other DBs
NCBI-GeneID:
117714358
NCBI-ProteinID:
XP_034366968
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Position
8:complement(16336054..16376492)
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AA seq
866 aa
AA seq
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MAASRGRSKKRSNFELSPDNLPLRSSGRQAKKKAVEITDEDEDGSSEKKYRKCEKAGCTT
AYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTAWKRVWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPHMARTYRCGMKPNTVTKPD
TPDHCSFPEDLRVMEVSNHWWYSMLIQPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRA
TVTATTTATGSASPAEMEPSKAASSSLVLGMNRYFQPFYQPNECGKALCVRPDVMELDEL
YEFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHVIVRGLVRIRCVQEVERILY
FMTRKGLINTGVLTVGAGQHLLPKHYHNKSVLVVGAGPAGLAAARQLHNFGMKVTVLEAK
DRIGGRVWDDKSFKGVVVGRGPQIVNGCINNPVALMCEQLAISMRKLGERCDLIQEGGRI
TDPTIDKRMDFHFNALLDIVSEWRKDKTLLQDVPLGEKIEEIYRAFVKESGIQFSELEGQ
VLQFHLSNLEYACGSSLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLDIRL
KSPVQSIDYTGDEVQVTTTDGVGHSAQKVLVTVPLAILQRGAIQFNPPLSEKKMKAINSL
GAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASQRGLFAVFYDMDPQQSVLMSVITGE
AVASLKTMDDKQVLQQCMGILRELFKEQEIPDPTKYFVTRWSTEPWIQMAYSFVKTFGSG
EAYDIIAEEIQGTVFFAGNKQAFPTNCNWGIFEWCSRSKQDCSLLKRTCMDLKFCIPNGS
LKHKLNLFCKRGDSVTLYSKIEMFLW
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatctcgagggagatcaaagaagagaagcaatttcgagctttctcctgataac
ctgcctttgaggagctccgggcggcaggcaaagaagaaagcagtagagatcacagatgag
gatgaagatggttcgtcagagaagaagtacaggaaatgtgaaaaggcaggctgtacgaca
gcgtatcctgtgtgctttgcaagtgcttctgaaagatgtgccaaaaatggctacacctcc
cgatggtatcacctttcctgtggggaacacttctgcaatgaatgctttgaccactactac
agaagccacaaagacggatatgacaaatatactgcatggaaaagagtatggaccagcaat
ggcaagacggagccgagccccaaggcgttcatggcagaccagcagctgccctactgggtt
cagtgcacaaaacctgagtgtgggaagtggaggcagcttaccaaggaaatccagcttact
ccacacatggcaaggacttaccgctgtggcatgaagccaaatactgttaccaagcctgac
acccctgatcattgttctttccctgaggatctgagggtgatggaagtttccaaccactgg
tggtactccatgctcatccagcctccattgctgaaggacagtgtggcggcaccgctgctc
tctgcctactaccccgactgcgttggcatgagcccctcctgcaccagcacacatcgggct
accgtcacagccactaccactgccaccggcagtgccagcccagcggagatggaaccctcc
aaggcagcctcctcttcacttgttctaggcatgaaccggtacttccagccgttctaccag
cccaatgagtgtggcaaagctctgtgtgtgaggccggacgtgatggagctggatgagctc
tatgagtttccagagtattctcgagaccccaccatgtacctggctctgcgaaacctcatc
cttgctctgtggtacacaaactgcaaagaagctctcacccctcagaagtgcattccccat
gtcatcgttcggggccttgtacgcatccgatgcgttcaggaagtggagaggattctttac
ttcatgacaaggaagggtctcatcaacacgggagttctcaccgtgggagccggccagcat
cttcttcctaaacactaccataataaatctgttctggttgttggggctggtccagcaggc
ttagcagctgctaggcaactccataactttgggatgaaggtgactgtcctggaagccaaa
gaccgaattggaggccgagtatgggatgacaagtcctttaaaggcgtggtagtaggaaga
ggaccccagattgtcaatggctgtattaataacccagtagccctaatgtgtgagcaactt
gccatcagcatgcgtaagttgggagagagatgtgacttaattcaggaaggtggacggata
actgaccccactattgacaagcgcatggattttcattttaatgctctcttggatattgtc
tctgagtggaggaaggataagactctgctccaagatgtccctttaggagagaagatagag
gagatttaccgagcttttgtgaaggagtctggcatccagttcagcgagctggagggacag
gtgctgcagttccacctgagtaacctggagtatgcttgtggcagcagcctgcaccaggtg
tcggctcgctcctgggatcacaatgaattctttgcccagtttgctggtgaccacactctc
ctgactccaggctactccactatcattgagaaactggctgaaggactagatatccgactc
aaatctccagtacaaagtatagattatactggagatgaagtgcaagtcaccacgacagat
ggtgtggggcattctgcacaaaaggtattagtcactgtaccactggccatactacagaga
ggtgccatccagtttaatccacctctgtcagagaagaagatgaaggccatcaacagcttg
ggtgcaggcatcattgaaaagatcgccttgcagtttccatatagattttgggacagtaaa
gttcaaggggctgacttttttggccatgttcctcccagtgccagccaacgagggctcttt
gctgtattctatgacatggacccccagcagagtgtactgatgtcggtgatcaccggggag
gcagtggcatccctcaagaccatggatgacaagcaggtgctgcagcagtgcatgggcatc
cttcgggagctgtttaaggagcaggagatcccagatcccacaaagtattttgtcacacgg
tggagtacagagccatggatccagatggcatatagtttcgtgaagacctttggaagtggc
gaggcctatgacattattgctgaagaaatacaaggaaccgtcttttttgctggcaacaaa
caggcatttcccacaaactgtaactggggcatatttgagtggtgttcgagaagcaagcaa
gattgcagccttttaaaaagaacttgtatggacctaaagttctgtatcccaaatggaagt
ttgaaacataagttaaacttgttttgcaagagaggggactctgtgactctgtatagtaaa
attgaaatgtttctgtggtga
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