Arvicanthis niloticus (African grass rat): 117714640
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Entry
117714640 CDS
T08817
Symbol
Pprc1
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
anu03029
]
117714640 (Pprc1)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
117714640 (Pprc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117714640
NCBI-ProteinID:
XP_034367080
LinkDB
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Position
1:152447095..152462345
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AA seq
1634 aa
AA seq
DB search
MAARRGRRDRVAPPPTGGPGPDPGGGVRGGGWASRSQAPYGTVGSVSAAEQVHEEGDDSS
FVSLSRLGPSLREKDLEMEELILQDETLLETMQSYMDASLISLIEDFGEQSRLSLEDQNE
MSLLTALTEILDNADSENLSPFDTIPDSELLVSPRESSSLHKLLNLSRTPPERDLITPID
PLGPSTGNSRVNGVEMSLADSPWDFSPPPFLETSSPKLPSWRPSRPRTRWGQSPSPQQRS
DGEEEEEVAGFSGQMLADELDNSVNNLDFPMHLACPEEEDMSAAAADVAVSAPGDESISS
LSELVRAMHPYCLPNLTHLASLEDELQEQADDNLTLPEGCVVLEIVGQAATAGDDLEIPV
VVRQIPPGSQSVLLDESVGTSSALQLLMPTAESGTEAVVPQVAPCPDQELPLNSACLLEP
REIMETLAPKEPQNLPASASQGSQKVPRKGRKKKKNKQQPAACLEGYTRRLRSSSRGQST
VATEVNSQEELQRQVAVPQSRGKPRAWARAWAAALEKTGSENLETSAGQESPAEEDALDL
CPKLVETSQANPSLSLNDSAQAGSMPLNSVEDDSPAVGNALPVDQASSRTELLGPLPVGP
MLTSPVMPDRTGIEPAVAVPTSDNLSPADAILASTVTVEPVPNDLAPVDPVPVKCRPADP
RRAAAAAAAAQGNRPSLASADHPKVIIPEVKDAVGPPKVEGTTSATTQEARPRPLSLSEY
RQRRQQRQTEAEDRNSQPPAGKWPSLPETPKGLADIPCLVPSAPAKKTAPQRSPVAVPEP
CFVSVGSNPASPTPEPSASKLMVSTHSEQVSSHEMPLPVRPPPPTLQSVSPAGPIPSTVP
TPLPFPPSIPPLLSLPSSGHGVPNLPPPPLQPPGLPVSMRQMPPDPYTQYAPVPPWPCYP
SVSPSGYSCLPPPPAMPIVSGTPGTYAVPPTCNVPWVPPPAPVSPYSSSCAYGSLGWGPG
LQQPPFWSTVSPPPLSSVSTGRVVPPANVELSSNSAGPPEDTLPVPVTPSLSSGPVSPKA
PPAEPTKLETQPVPVSPQPKHKVSTLIQSPQIKAPPTLSAEGVVTVESVSERLKPETQEN
RPRERAVSTAIKAVPIPKQSTAAKLPAVHPARLRKLSFLPAPRTQGPEDVVQAFISEIGI
EASDLSSLLEQFEKSEAKKECPLPAPADSLAVGNSGSIDTPQEKKPLDRLQAPELANVAG
LTPPATPPHQLWKPLAAVSLLAKAKSPKSTAQEGTLKPEGITEAKPPAAACLQEGVHGPS
PVHVGSGDHDYCVRSRTPPKKMPALVISEVGSRWNVKRHQDITIKPVLSLGSATPLLPCT
TASQEPLDHRTSTEQADHSAPCFAPSTLLSPEASPCRNDMNPRTPSEPPDKQPSVRCYRK
ACRSVSPPSRGWQGRRGRSSRSVSSGSSRSSEASSSSSVSSSSRSRSRSRSLSPPNKRWR
RSSCSSSGRSRRCSSSSSSSSSSSSSSSSRSRSPSVSPCRRSDRRRRYSSYRSNDHYQRQ
RVLQKERAIEERRVVFIGKIPGRMTRSELKQRFSVFGEIEECTIHFRVQGDNYGFVTYRY
AEEAFAAIESGHKLRQADEQPFDLCFGGRRQFCKRSYSDLDSNREDFDPAPVKSKFDSLD
FDTLLKQAQKNLRR
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgccggggacggagagaccgagtcgcgccgcctccgactgggggccccggt
ccagaccctggcggtggagtgcgcggcggcggttgggcgagtcgaagccaagcgccgtat
gggaccgtgggctccgtgagcgccgcggagcaggtccatgaggagggggatgactctagc
tttgtcagtctttctcgactgggcccatctctgagggagaaagacctggaaatggaggaa
ctgatactgcaggatgagacactactggagaccatgcagagctacatggatgcctccctc
atatccctcattgaggattttggagagcagagcaggttatctttggaggaccagaatgag
atgtcgctgctcacagctctgactgagatcttggacaatgctgattctgagaacctgtcc
ccatttgataccattcctgattcagagctgcttgtgtctcctcgggagagctcctctctg
cacaagttgctcaatctctctcggacacccccagaacgtgacctcatcaccccaattgac
cctttggggcccagcacaggaaatagtcgggtgaatggggttgagatgtcccttgcagat
tctccatgggacttctctccacctcccttcttggaaacttcttcccctaagctgcctagc
tggagaccctcaagaccaagaactcgatggggtcagtccccttctccccagcagcgcagt
gatggagaagaggaggaggaggtcgctggcttcagtggtcagatgcttgctgatgaactg
gacaactcggtgaacaatttggactttcccatgcacttggcatgccctgaggaggaggat
atgtcagcagcagcagcagatgtggcagtgtcagcccctggtgacgagagcatctcttct
ctgagtgagctggtgcgggctatgcacccgtactgcttgcccaacctcacccacttggca
tcacttgaggatgagcttcaggaacaggctgatgacaacttgacactgcctgagggttgt
gtggtgctggagattgtgggccaggcagctacagctggtgatgacctggagatcccagtc
gtggtgcggcagattcctcctggatcccagtctgtgctcctggatgagtctgtagggacc
agctctgccttgcagctactcatgcccaccgcggagtccgggacagaagctgttgtgcct
caagttgccccttgccctgatcaagagttaccactgaattctgcctgcttattggagccc
agggaaatcatggagacactggcacccaaggagcctcagaacctacctgccagtgcaagt
cagggttctcagaaagttcccagaaagggcaggaagaagaagaagaacaagcagcagcca
gcagcctgtttggaaggctataccaggaggctgagatcgtcttcccgtggacagtccact
gtggctacagaggtgaactctcaggaagagcttcagagacaggttgcagtccctcagagc
agagggaagccgcgggcttgggctcgggcatgggcggctgccttggagaagactgggtct
gagaatttagagacaagtgcaggacaggagagtcctgctgaagaagatgctctagatctc
tgtcctaagctggttgagaccagccaagccaacccctctctctcgttaaatgactctgct
caagctggctccatgcctctcaactctgttgaagatgattcccctgcagttggcaatgcc
cttcctgttgaccaggcttcatctagaactgagctgcttggtcctctcccagtaggtccc
atgctgactagcccagtcatgcctgacaggacaggaattgaacctgcagtggctgttccc
acttcagataatttgtctccagcggatgctatcctagctagcacagtgacagttgagcct
gtcccaaatgacctggctccagtagatcctgtgccagtcaagtgcagaccagctgatcct
agacgtgcagcagcggcagcggcagccgctcaggggaatcgtccttccctagcgtccgca
gaccatcctaaggtcatcatccctgaagtcaaggatgctgtaggtcctccgaaggtggaa
ggtactaccagtgctacaacccaggaagccagacctcggcctctcagcctgtctgagtac
cgtcagcgaaggcagcaacggcaaacagaagcagaagacaggaattctcagcccccagct
ggcaagtggcctagcctcccagagacccctaaagggctggcagatatcccttgtctcgtt
ccatcagccccagccaagaagacagctccacagagaagccctgtagctgtaccagagcct
tgttttgtgtctgtgggttctaaccctgcttctcctactcctgaaccatctgcaagcaaa
cttatggtttcaactcactctgaacaggtgtcatctcatgagatgccgcttccagttaga
ccaccccctcctactttgcagtctgtgtctcctgctgggcccatcccttctacagtgccc
actcctttgcctttccctccaagcatacctcctctgctttctcttccttcaagtggccat
ggagtccccaacctgcccccgcctcctttgcaacctcctggacttccagtatcaatgaga
caaatgccacctgacccctatactcagtatgcccctgtgccaccctggccttgttacccg
tctgtgtctccttctggctattcttgtctgcccccaccaccagcgatgcccatagtgtct
ggtactcctggtacctatgctgtacccccaacttgcaatgtgccttgggtaccccctcct
gcaccagtttcaccttacagctccagctgtgcctatgggtcccttgggtggggcccaggg
ctgcaacagcctcccttttggtctactgtttctccacctccgttgtcttcagtctctact
ggaagagttgttcccccagccaatgtggaactcagtagtaattcagctggtcctcctgaa
gatacgcttcctgtgccagtgactccttccctaagttctgggccagtcagccccaaagct
ccaccagcagaacctacaaagctggagactcagccagtgcctgtatctccccaaccgaaa
cacaaagtgtccaccttgatacagagtccccagatcaaggctccaccaactctgtctgct
gagggtgtagttactgtggagtctgtatcagagaggctaaagcctgagacccaggagaac
agaccaagggagagagccgtctctacggctatcaaggctgttcccataccaaagcagagc
actgctgcaaagctgcctgctgtccatccagcccgtctaaggaagctgtccttcctgcct
gctccacgcactcagggtcctgaggatgtggtacaggcattcatcagtgagattgggatt
gaagcatcagacctgtccagtctattggagcagtttgagaaatcagaagccaaaaaggag
tgtcctctcccggctcctgctgacagcttggctgtaggaaactcaggcagcattgacact
ccccaggagaagaaacccctagaccggttacaagccccagaactggccaacgtggcaggg
ctcacccctccagctacccctccccaccagttatggaaacccctggctgctgtctcactg
ttggccaaagccaaatctcctaaatctaccgcccaagagggaaccctgaagcctgaagga
attacagaggccaaacctccagctgcagcttgcctccaagaaggggtccatggccctagt
ccagtccatgtgggctctggagaccatgactattgtgtccgaagcaggacaccccccaaa
aagatgcccgctctagtcatttcagaggtgggctcccgatggaatgtcaagcgccatcag
gacatcaccatcaaacctgtcttgtcattgggctcagctactcccctactcccatgcaca
actgcttcccaggagccacttgatcacaggactagcactgagcaggcagatcattcagcg
ccttgttttgccccatccaccttgctgtctcctgaggcctcaccctgccggaatgacatg
aatcctaggactccctctgagcccccagacaagcagccgtcagtgcgctgttaccgaaaa
gcctgcagatcagtcagccccccaagtcggggctggcaaggccgccgtggccgcagcagc
cgttctgtcagctctgggtccagccggagcagtgaagcatcctcatcctcatcggtgtct
tcctcatcccggtcccggtcccggtcccggtccctctccccccccaacaagaggtggcga
aggtccagctgcagttcctctggacggtccagaaggtgttcgtcctcttcctcctcttct
tcctcttcctcctcctcatccagttccagaagccggtctccctctgtgtcaccttgcagg
agaagtgaccggaggcggcggtacagctcttaccgttcgaatgaccattaccaaaggcag
agagtgctgcagaaggagcgtgcaatagaagagagaagggtcgtcttcattgggaaaata
cctggccgaatgactcggtcagagctgaaacagaggttctctgtttttggagagattgag
gagtgtaccattcattttcgtgtccaaggtgacaactatggtttcgtcacttatcgttat
gctgaagaggcatttgcagccattgagagtggccacaagttgcgtcaggcagacgagcag
ccctttgatctctgctttgggggccgaaggcagttctgcaagaggagttactctgatctt
gactccaatcgggaagactttgatcctgcccctgtgaagagcaagtttgattctcttgac
tttgatacattgttgaaacaggcccagaagaacctccggaggtaa
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