Arvicanthis niloticus (African grass rat): 117714787
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Entry
117714787 CDS
T08817
Symbol
Lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
117714787 (Lrrtm1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_EndoS
LRR_NXF1-5
UL97
HemY_N
LRR_12
Motif
Other DBs
NCBI-GeneID:
117714787
NCBI-ProteinID:
XP_034367342
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Position
9:17478150..17481184
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AA seq
523 aa
AA seq
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MDFLLLGLCLHWLLRRPSGVVLCLLGACFQMLPAAPSGCPGQCRCEGRLLYCEALNLTEA
PHNLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTL
SSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCL
RRNKVAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTYIEPRIL
NSWKSLTSITLAGNLWDCGRNVCALASWLSNFQGRYDANLQCASPEYAQGEDVLDAVYAF
HLCEDGAEPTSGHLLSAAVTNRSDLAPPESSATTLVDGGEGLHDGTLEPITVALPGGEHA
ENAVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPASLRQLRQCFVTQRRKQKQKQTMHQ
MAAMSAQEYYVDYKPNHIEGALVIINEYGSCTCHQQPARECEV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctgctactcggcctctgtctacactggctgctgaggaggccctcgggggtg
gtcttgtgtctgctgggggcctgctttcagatgctgcccgccgcccccagcggatgcccg
gggcagtgtcggtgcgaggggcgtctgctgtactgcgaggcgctcaacctgaccgaggcg
ccccacaacctgtccggcctgctgggcttgtctttgcgctacaacagcctctcggagctg
cgcgccggccagttcacagggttaatgcagctcacgtggctgtatttggatcacaatcac
atctgctcggtgcagggggacgcctttcagaaactgcgccgagttaaggaactcacgctg
agttccaaccagatcaccgaactggccaataccacctttcggcccatgcccaacctgcgc
agcgtggacctgtcctataacaagctgcaggcgctagctccggatctcttccacgggctg
cggaagctcaccaccctgcacatgcgggccaatgccatccagttcgtgccggtgcgcatc
tttcaggactgccgcagcctcaagtttctcgacattggatataatcagctcaagagtctg
gcgcgcaactcttttgccggcttgttcaagctcacagagctacacctggagcataacgac
ttgatcaaggtgaactttgcccatttcccgcgcctcatctccctgcactcgctctgcctg
aggcggaataaggttgccattgtggtcagctctctcgactgggtttggaatttggagaaa
atggacttgtctgggaacgagatcgaatatatggagccccatgtgttcgagaccgtgccg
tacctgcagtccctgcaactggactccaaccgcctcacttacattgagccccgtatcctc
aactcctggaagtcccttacaagcatcactctggccgggaacctgtgggactgcgggcgc
aacgtatgtgccctagcttcctggctcagcaacttccagggacgttacgatgctaacttg
cagtgcgccagcccggagtacgcacagggcgaggacgtcttggatgcagtgtatgctttc
cacctgtgtgaggatggggccgagcccaccagcggccacctcctgtcggcggccgtcact
aaccgcagtgacctagcgccccctgagagctcagccacgactctggtggacggtggggag
gggctgcacgatggcacgcttgagcccatcacggtggctctccccggaggtgagcacgca
gagaacgctgtgcaaatacacaaggtggtcacgggcacgatggccctcatcttctccttc
ctcatcgtggtcctcgtactctacgtatcctggaagtgtttcccagccagcctcaggcag
ctcagacagtgctttgtcacgcagcgcaggaagcagaagcagaaacagaccatgcatcag
atggctgctatgtctgcccaggaatattatgttgattacaaacctaatcacatcgagggg
gccctggttatcatcaacgagtatggctcgtgtacctgtcaccagcaacctgcgagggaa
tgcgaggtgtga
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