Arvicanthis niloticus (African grass rat): 117714795
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Entry
117714795 CDS
T08817
Symbol
Mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117714795 (Mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117714795 (Mbd4)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117714795 (Mbd4)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
117714795 (Mbd4)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117714795 (Mbd4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
117714795
NCBI-ProteinID:
XP_034367351
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Position
9:complement(53884739..53895991)
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AA seq
564 aa
AA seq
DB search
MESPNVGDNKVPSVTAGESLVPDPPWDRCKEDVAVGLEGEGADGKDLVMSSECSSLLQEP
TAATLSSCTAVTECHQPVPCGWERVVKQRLSGRTAGRFDVYFISPQGLKFRSKRSLANYL
LKNGEIFLKPEDFDFTVLSKGGISPGYKHQRLTALTSQQPNETDISQQNLRTRSKRKRAV
LPLPSGNSESPDSSRLSDSNSACLLSKEHKGIQHADSGKKRKPKRKVTVLNGIASPKTKQ
RCRKSLSYSTRRNRKRRSVVQKAGADSELVPQESQLNRTLCPADACAGETVSLSGEEKGL
GQEKSANPGLDLCFTQVTSDTTNKLHSTEAADDAKREQTFLESEEMRSKGDGERESHLPI
DVLQGGSEMPSCSQAKKHFTSETFGDNIPQTQVEKRKTSLYFSSKYNKGALSPPRRKAFK
KWTPPRSPFNLVQEILFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARTADW
RDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCVNEWKQV
HPEDHKLNKYHDWLWENHEKLSLS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccaaacgttggggacaacaaagtcccctccgtcaccgctggagagagccta
gttccagacccgccttgggatcgctgcaaggaagatgtcgctgttggactggaaggagag
ggagccgatggaaaggacctggtgatgagcagtgagtgcagctcccttctccaggagccc
actgctgctactctgtctagttgtactgcagtgacagaatgccaccagcctgtcccatgt
ggatgggaaagagttgtgaagcaaaggttatctgggagaactgcaggaagatttgatgta
tactttatcagcccacaaggattgaagttcagatcaaaacgttcacttgctaattatctt
ctcaaaaatggagagatttttcttaagcctgaagattttgattttactgtactgtctaaa
gggggcatcagtccaggttataaacaccaacgtttgacagctctaacttcccagcagcca
aatgaaactgacatttcacagcagaacctcaggacacgaagcaagaggaaaagagctgtg
ttgcctctgcccagtggtaattcagagtccccagatagcagcagactgtctgactctaac
tctgcttgtttgctatcgaaagaacataagggcattcagcatgctgactctggaaagaag
agaaagcccaaaagaaaggtgactgttttgaacggaattgcaagtccaaaaaccaaacaa
aggtgcaggaagagtctctcgtattctactcgaagaaacagaaaaagaagatctgtggtt
caaaaagcaggtgctgatagtgagctggttccacaggaaagtcaactcaacagaaccctc
tgccctgcagatgcctgtgcaggggagactgtcagcctgagtggagaagaaaagggcctg
ggacaagaaaaatcagcaaacccaggattggatctttgtttcacacaagtaacttctgac
accacaaacaaattacattcaactgaagcagcagatgatgcaaagcgtgagcagactttt
ttagaatcagaggaaatgagatcgaagggagacggagagagggagtcacatttgcctatt
gacgttttacagggtggctctgaaatgcccagctgctcacaagccaagaaacactttact
tctgagacatttggagacaacatcccacaaacacaagtagaaaaaaggaaaacaagcctg
tatttttccagcaagtacaacaaaggagctcttagccccccaagacgcaaagccttcaag
aaatggacccctcctcggtcaccttttaatcttgttcaagaaatacttttccatgatcct
tggaagctcctcatcgcgactatatttctcaatcggacctcaggcaagatggccatccct
gtgctgtgggagtttctagaaaagtacccttcagctgaagtggcccgaactgctgactgg
agggacgtgtcagagcttcttaagcctcttggtctctatgatctccgtgcaaaaaccatc
atcaagttctcagatgaatatctgacaaagcagtggcggtatccgattgagcttcacggg
attgggaaatacggcaacgactcctaccggatcttttgtgtcaatgaatggaagcaggta
caccctgaagaccacaagttaaataaataccacgactggctttgggaaaatcatgaaaaa
ctaagtctatcttaa
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