Arvicanthis niloticus (African grass rat): 117714862
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Entry
117714862 CDS
T08817
Symbol
Xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117714862 (Xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117714862 (Xpc)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117714862 (Xpc)
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
117714862
NCBI-ProteinID:
XP_034367462
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Position
9:complement(31261656..31289468)
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AA seq
930 aa
AA seq
DB search
MARKRTAGGRRRKRGQELEDNKPARPEESDADDFEDEKQKPPKKCFLPQVSQGKRKRGCS
DPGDPTNGAAKKKGAKASAKSKKLKALKEEALSDGDDFRDPPADCKKAKKHPKREVVDQG
TDEDDSEDDWEEVEELTEPVLDVGEHSATSRSDLPVKAVEIEIETPEQEKARKRSEKIKM
EFETYLRRAMKRFNKEVQENMHKVHLLCLLASGFYRNSICQQPDLLAIGLSIIPIRFTKV
PLQDRDVYYLSNLVKWFIGTFTVNADLSASEQDSLQTTLERRIAIYSARDNEELVHIFLL
ILRALQLLTRLVLSLQPISLKSAVTKERKSSKETTLEDPGGSAESPSNIPESHNKPKTNK
RIKQEETLSEGSGKATARGKRGKATASSRQRRKPSCSEGEETEQEMRGHPHARKRRAAAN
VSYKEESESDGAGSGSDFELSSGEGQHSSDEDCEPGPRKKRASAPQRTKAGAKSASKTQC
GSQCEPPSFPATSSSSSGCKRGKKVSSGGEEMEHRKAVGIDQWLEVYCEPQAKWVCVDCV
HGVVGQPVACYKYATKPMTYVVGIDSNGWVRDVTQRYDPAWMTATRKSRVDTEWWAETLR
PYRSPLMEREKKEDQEFQAKHLNQPLPTSISTYKNHPLYALKRHLLKFQAIYPETAAVLG
YCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRARKARLSEPQLHDCN
DLALYGHWQTEEYQPPIAVDGKVPRNEFGNVYLFLPSMMPVGCVQMNLPNLHRVARKLGI
DCVQAITGFDFHGGYCHPVTDGYVVCEEFRDVLLTAWENEQAIIEKKEKEKKEKRALGNW
KLLVRGLLIRERLQLRYGTKNEAAAPHTNPGGGLSSDEEEGTSSQAEAAKVLAASWPQNR
EATERKPECRKMTRRRRAAEASHLFPFEKL
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaagcgcaccgcaggcggaaggcggcggaagcgcggccaggaattggaggac
aacaaaccagcccggcctgaggagagcgatgcggatgactttgaagatgagaaacagaaa
cccccaaagaagtgctttctcccacaagtttcccaaggaaagaggaagagaggctgcagt
gatccaggggaccccacaaatggtgcagcaaaaaagaagggggccaaagccagtgctaaa
tccaagaagctcaaggctctgaaggaggaagcactcagcgacggggatgatttcagggac
ccaccggctgactgcaagaaggcaaagaaacatccaaaaagagaggtggtggaccaaggc
actgatgaggatgacagcgaggatgactgggaggaggtggaagaacttactgagcctgtg
ctggacgtgggagaacattctgccacctcacggtctgacctgcctgtgaaggcagtggag
atagaaattgaaacaccagagcaggagaaggcacggaaaagaagtgagaagataaagatg
gagtttgagacatacctgcggagggcgatgaagcgtttcaataaggaagtgcaggagaac
atgcacaaggttcacctgctatgcctgctggccagtggcttctatcgaaatagcatctgc
cagcagccagatctgctggccattggcctctccatcatcccaattcgctttaccaaggtg
ccacttcaagacagggatgtctactacctttcaaatttggtaaagtggttcattggaacc
ttcactgtcaatgctgacctttcagccagtgagcaggacagcctacagacgaccttggaa
aggaggattgccatttactctgcgagggataatgaagagttggtccatatatttcttctg
attcttcgggctctgcagctgctcacccggctggtcttgtctctgcagcccatttccctg
aagtcagctgtgacaaaggagaggaaatcttccaaggaaacaactttagaggaccctgga
ggctctgcagaatctcccagtaacattccagaaagccacaacaaacccaagaccaacaaa
agaatcaaacaagaagaaaccttgtctgagggcagtggcaaggcaaccgccagagggaag
agaggcaaagctactgcgagcagcagacagcggaggaagccctcctgtagcgagggagag
gagactgagcaggaaatgcggggccacccacatgccaggaagcggcgtgctgctgccaac
gtgtcttacaaagaggagagtgagagtgatggggcaggcagtggctctgactttgaactg
tccagtggggagggccagcattcctctgatgaggattgtgagcctggccctcgaaagaag
agggcctcagctcctcagaggacaaaggctggggctaagagtgcttccaagacccaatgt
ggaagccagtgtgagccaccaagctttccagccacatcttcaagctcttcaggctgtaag
agaggcaagaaggtttccagtggtggtgaagagatggaacataggaaagctgttggtata
gaccagtggctggaggtgtactgtgagccacaggcaaagtgggtgtgtgtggactgtgtg
catggtgtggtgggccagcctgtggcctgttacaaatatgctaccaaacccatgacctat
gttgtaggcattgacagtaatggctgggtccgagatgtcacacagaggtatgacccagcc
tggatgacagcaacccgcaagtcccgggttgacactgagtggtgggctgagaccttgaga
ccctatcggagcccacttatggagagggagaagaaagaagaccaggagtttcaggcaaag
cacctgaaccagcctttgcccacctccatcagcacatacaagaaccaccctctgtatgcc
ctgaagcgccacctcttgaaattccaggctatctaccctgagacagctgcggtccttggc
tattgtcgtggagaagctgtctattccagggattgtgtgcataccttgcactccagggac
acatggctgaagcaagcaagagtggtgcgtcttggagaagtgccctataagatggtgaaa
ggcttctctaaccgtgcccggaaagcccggctttcggagccccagctgcatgactgcaat
gacttggccctctatggtcactggcagacagaagagtatcagcctcctatagctgtagat
gggaaggttcctcggaatgagtttgggaacgtgtacctcttcctgccaagcatgatgcct
gtcggctgtgtccagatgaacctgcctaacctgcaccgtgtggcccgcaagctgggcatt
gactgcgtgcaggccatcactggcttcgatttccatggaggctattgccatccagtaact
gatggctacgttgtctgtgaggaattcagagacgtgctgctgactgcttgggagaatgaa
caggccatcattgaaaagaaggagaaggagaaaaaggagaagcgggcgttggggaactgg
aagctgctggtcagaggactgctcatcagagagaggctgcaactccgctatgggaccaag
aatgaggcagcagctccccacacaaatccaggaggcggactctcttctgatgaagaggaa
ggaaccagttcacaagcagaagcagccaaagtcctggctgcctcctggccacagaaccga
gaggctacagaacggaagcctgagtgcaggaagatgactcggaggaggcgggcggcagag
gcttcccatctcttcccatttgagaagctatag
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