Arvicanthis niloticus (African grass rat): 117714905
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Entry
117714905 CDS
T08817
Symbol
Cntn4
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117714905 (Cntn4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
117714905 (Cntn4)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
Contactins
117714905 (Cntn4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
Others
117714905 (Cntn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Sp38
Ig_C17orf99
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
117714905
NCBI-ProteinID:
XP_034367535
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Position
9:45298801..45507539
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AA seq
806 aa
AA seq
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MGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGI
LEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQTINDIHVAMEESVFWECKA
NGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAEL
SVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISED
GNLRIINVTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPC
QVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQT
SVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSV
GWQAVSTVPELVDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPE
VTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLASADASRY
VFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEV
FWASPIGKNRGRIQGYEVKYWRHDDKEENARKIRTVGNQTSTKITNLKGSALYHLSVKAY
NSAGTGPSSATVNVTTRKPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLY
RWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNSYARGS
GASTSNACTLSAISTIMISLTARSSL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatatgagcccaaaatagaagtacagtttccagaaactgtcccagctgagaaa
ggaacaacagtcaagctggaatgctttgccttaggaaacccagtcccaactattctatgg
cgaagagctgatggaaagccaatagcaaggaaagccagaagacataagtcaaatggaatt
ctagaaattcccaactttcagcaggaagatgctggttcatatgagtgtgtggctgaaaac
tccagaggcaaaaatgtagcaaagggacagttgactttttacgctcaacctaactgggtt
caaacaataaatgatatccacgtggccatggaagaaagtgtcttctgggaatgtaaagca
aatgggaggcccaagcctacctacaggtggctaaaaaatggtgacccactgttaacacgg
gatagaatacaaatcgagcaaggaacactcaacataacaatagtgaatctctcagatgct
ggcatgtaccagtgtgtggcagagaataaacatggagttatcttttccagcgctgagctt
agtgtaatagccgaaagtccagatttttcgagaacactcttaaaaagagtaacacttgtc
aaagtgggaggtgaagttgtcattgagtgcaagccgaaagcatctccaagacctgtctac
acctggagaaagggaagagaaatattaagagaaaatgaaagaattaccatttctgaagat
ggaaacctcagaatcatcaatgtgactaaatctgatgctggaagttacacctgcatagcc
acgaaccatttcggaaccgccagcagtactggaaatgtggttgtgaaagatccaacaaag
gtgatggttcccccttccagcatggatgtcactgtgggagaaagcattgttcttccatgc
caggtgacacatgatcattccttggacattgtgtttacttggacatttaatggacatttg
atagactttgacaaagatggagaccactttgaaagagttggaggggattcagctggtgat
ttgatgatccgaaacatccaactgaagcatgctgggaaatatgtctgcatggtccaaaca
agtgtggacaaactctctgctgctgcggacctgattgtaagaggtcctccaggtcctcct
gaagctgtgaccatagatgaaatcacagacaccactgctcagctttcttggagacctgga
cctgacaaccacagccccatcaccatgtatgtcatccaagctaggactccattctccgtg
ggctggcaagcagtcagtacagttccagaactcgttgatgggaagacatttacagcaact
gtggtgggtttgaatccctgggttgaatatgaattccgcactgttgcagctaatgtgatt
ggcattggggaacccagccgaccctcagagaaacggaggacagaagaggccctccctgaa
gtcaccccggctaacgtcagtggcggtggaggcagcaaatctgaactggttataacctgg
gagactgtccctgaggaattacagaatggcagaggctttggttacgtggtagccttccgg
ccacatggcaaaatgatctggatgctgacagtgctggcttcagctgacgcctccagatac
gtgttcaggaatgagagcgtgcgtccattctctccctttgaggttaaagtgggtgtcttc
aataacaaaggggaaggccctttcagtcccaccacgctggtgtattctgctgaagaagaa
cccaccaagccaccagccagtatctttgccaggagtctttctgccacagatattgaagtt
ttctgggcctcccctattgggaagaacagaggacggattcaaggttatgaggtaaaatat
tggagacatgatgacaaggaagaaaatgcgagaaaaatacgaacagttggaaatcagaca
tccacaaaaatcaccaacttgaaaggaagtgctctgtatcacttatccgtcaaggcgtat
aactcagctgggacaggaccctccagtgcaacagtcaatgtcacgaccagaaagccacca
ccaagccaaccccctggaaacatcatatggaattcatcggactccaaaattatcctgaac
tgggatcaagtgaaggccctggataatgagtcagaagtaaaaggatacaaagtcttgtac
cgatggaacaggcaaagcagcacatctgtcattgaaacaaacaaaacatcagtggagctc
tctttaccttttgatgaagattacatcatagagatcaagccattcagtgatggaggagac
ggcagcagcagtgagcaaatccgaatcccaaagatttcaaattcctatgcaagaggatct
ggggcttctacctccaatgcgtgtacattgtcagccatcagtacaataatgatctctctc
acagccaggtctagtttatga
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