KEGG   Arvicanthis niloticus (African grass rat): 117714960
Entry
117714960         CDS       T08817                                 
Name
(RefSeq) tubulin alpha-3 chain isoform X1
  KO
K07374  tubulin alpha
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04145  Phagosome
anu04210  Apoptosis
anu04530  Tight junction
anu04540  Gap junction
anu04814  Motor proteins
anu05010  Alzheimer disease
anu05012  Parkinson disease
anu05014  Amyotrophic lateral sclerosis
anu05016  Huntington disease
anu05020  Prion disease
anu05022  Pathways of neurodegeneration - multiple diseases
anu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:anu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117714960
  09143 Cell growth and death
   04210 Apoptosis
    117714960
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117714960
   04540 Gap junction
    117714960
  09142 Cell motility
   04814 Motor proteins
    117714960
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117714960
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    117714960
   05012 Parkinson disease
    117714960
   05014 Amyotrophic lateral sclerosis
    117714960
   05016 Huntington disease
    117714960
   05020 Prion disease
    117714960
   05022 Pathways of neurodegeneration - multiple diseases
    117714960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:anu03019]
    117714960
   03036 Chromosome and associated proteins [BR:anu03036]
    117714960
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:anu04812]
    117714960
   04147 Exosome [BR:anu04147]
    117714960
Messenger RNA biogenesis [BR:anu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117714960
Chromosome and associated proteins [BR:anu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117714960
Cytoskeleton proteins [BR:anu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117714960
Exosome [BR:anu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117714960
  Exosomal proteins of other body fluids (saliva and urine)
   117714960
  Exosomal proteins of colorectal cancer cells
   117714960
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117714960
NCBI-ProteinID: XP_034367608
LinkDB
Position
9:complement(62715337..62722734)
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctatccacgtggggcaggcaggtgtccagatcggcaatgcctgc
tgggaactgtactgccttgaacatggtattcagcctgacgggcaaatgccaagtgacaaa
accattggcggtggggacgactcattcaacacattcttcagtgagactggagccggcaaa
catgtgcccagggcagtgtttgtggacctggagcccactgtggtcgatgaagtgcgcacg
ggaacctaccggcaacttttccacccagagcagctgatcactgggaaagaagatgcagcc
aataattatgccagaggtcactacaccattggcaaagagattgtcgacctggtcctggac
cgaatccgaaaactggccgatctgtgcacgggactgcagggcttcctcatcttccacagc
tttggaggtggcacaggatctgggtttgcatctctgcttatggagcggctttcagtggac
tatggcaagaagtccaagctggaatttgccatttacccagccccccaggtttccacagcg
gtcgtggagccttacaactccatcctgaccacgcacacgacgctggaacattccgactgt
gctttcatggtggataacgaagccatctacgacatctgccgcaggaacctggatattgag
cgccccacctacaccaacctcaatcgtctgattgggcagatcgtgtcatccatcacagcc
tccctgaggtttgacggggccctgaatgtggacttaacagaattccagaccaacctggtg
ccgtaccctcgcatccactttcccctggcgacctacgccccagtcatctcggccgagaag
gcataccatgagcagctgtcagtggcagagatcaccaacgcatgcttcgagccagccaat
cagatggtcaagtgtgaccctcgccatggcaaatacatggcctgctgcatgttgtacagg
ggggatgtggttccaaaagatgtcaacgcagctattgctactatcaagaccaagcgcacc
atccagtttgtggactggtgcccaactggatttaaggtgggtattaactaccagcctccc
accgtggtccctgggggagacttggccaaggtgcagcgggccgtgtgcatgctgagcaac
accaccgccatcgcggaggcctgggcccgcctggaccacaaatttgacctcatgtatgcc
aagcgagcctttgtgcactggtacgtgggagaaggcatggaggaaggggagttctcagag
gcccgggaggacctggcagcgctggagaaggattatgaagaggtgggcgtggattctgtg
gaagcagaggcagaagaaggggaggagtactga

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