Arvicanthis niloticus (African grass rat): 117715083
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Entry
117715083 CDS
T08817
Symbol
Slc6a12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04082
Neuroactive ligand signaling
anu04721
Synaptic vesicle cycle
anu04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117715083 (Slc6a12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
117715083 (Slc6a12)
04721 Synaptic vesicle cycle
117715083 (Slc6a12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117715083 (Slc6a12)
Transporters [BR:
anu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117715083 (Slc6a12)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117715083
NCBI-ProteinID:
XP_034367638
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Position
9:59250294..59272906
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AA seq
614 aa
AA seq
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MDGKVAVHEDGYPVVSWVPEEGEMMDQKGKGRVKDRGQWTNKMEFVLSVAGEIIGLGNVW
RFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQYSSQGSVTAWRKICPLLQGIGM
ASVVIESYLNIYYIIILAWALFYLFSSFTSQLPWTTCTNSWNTEHCVDFLNRSSARAVSY
SENVTSPVMEFWERRVLGITSGIHDLGSLRWELALCLLLAWIICYFCIWKGVKSTGKVVY
FTATFPYLMLIILLIRGVTLPGAYQGIVFYLKPDLLRLKDPQVWMDAGTQIFFSFAICQG
CLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFVVFSILGFMSQEQGIPISEVAESGP
GLAFIAFPKAVTMMPLSQLWSCLFFIMLLFLGLDSQFVCMECLVTASMDMFPQQLRKSGR
RELLILAVAIVCYLMGLLLVTEGGMYIFQLFDYYASSGICLLFLSLFEVICIGWVYGADR
FYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFFFSLSKYTPLKYNNVYTYPSWGYSIGW
LLAFSSMACVPLFIIITLLKTQGSFKKRLQRLITPDPSLPQPGRHPPQDGSSSQNCSPSP
AKQELIAWEKETHL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaaggttgcagtccatgaagatgggtatcctgtggtctcttgggtccctgag
gagggagagatgatggaccagaaaggcaagggccgggtgaaggatcgaggccaatggacc
aacaagatggagtttgtgctgtcagtggctggggagatcattgggctaggcaatgtctgg
aggtttccctatctctgctacaaaaatggaggcggagctttcttcatcccctacttcatc
ttcttcttcagctgtggcatcccggtgttcttcctggaggtggcactgggccagtatagc
agccaggggagtgtaactgcttggaggaagatctgtccccttctccaagggattggcatg
gcttctgttgtcatcgagtcttatttaaacatctattacatcatcatcctcgcctgggcc
ctcttctacctgttcagctccttcacctcgcagcttccgtggacaacctgcaccaactcg
tggaacacagagcattgtgtggactttctgaaccgctcatcggccagagcagtgagctac
tctgagaacgtcacctcacccgtcatggaattctgggagagacgggtgttgggtattact
tcgggaatccatgacctggggtccctgcgttgggagctggccttgtgcctcctgcttgcc
tggatcatctgctacttctgcatctggaagggtgtcaagtctacaggcaaggttgtttac
ttcacggccactttcccctacctgatgttgattattctcctgatccggggtgttaccctt
ccgggagcctaccagggcatcgtcttctacctgaagccagacttgctccgcctcaaggac
ccccaggtgtggatggatgcgggcacccagatcttcttctcctttgccatctgccagggg
tgcctgacagccctgggcagctacaacaagtaccacaacaactgctacagggactccatt
gctctctgtttcctgaacagtgctaccagcttcgtggctgggtttgttgtcttctccatc
ctgggcttcatgtctcaggagcagggaatacccatatctgaagtggctgagtcaggtcct
gggctggccttcattgccttccccaaagccgtgacaatgatgcctttgtcccagctgtgg
tcctgtctcttcttcatcatgctcctatttctaggactggacagccagttcgtctgcatg
gagtgcctggtgactgcttccatggacatgtttcctcagcagctccgaaagagtggccgg
cgggagctgctgattcttgctgttgccattgtgtgctacttgatggggctccttctggtc
accgagggtgggatgtacatcttccagctctttgactactatgcctccagcggcatatgc
ctactcttcctctccttgtttgaggtgatctgcatcggctgggtgtacggggcggaccgt
ttctatgacaacgtagaagacatgattggctatcggccatggcccttggtgaagatctcc
tggctcttcctgactcctggtctttgcctggctaccttcttcttctccttgagcaagtac
acacctctcaaatacaacaatgtctacacgtacccttcttggggatactccattggatgg
ctcttggctttttcctccatggcctgtgtcccactttttatcatcatcaccctcctgaag
acccagggctccttcaagaagcgccttcaaagactcatcacgccggatcccagtctgccc
cagccagggcggcatccacctcaggatggctcctcatctcaaaactgttcaccctctcca
gccaagcaagaactcattgcctgggagaaggagactcatttgtag
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