Arvicanthis niloticus (African grass rat): 117715118
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Entry
117715118 CDS
T08817
Symbol
Tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117715118 (Tmf1)
Membrane trafficking [BR:
anu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117715118 (Tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
117715118
NCBI-ProteinID:
XP_034367672
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All DBs
Position
9:complement(36672370..36697855)
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AA seq
1092 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQEEEPSAWAEAIPYGEPGISPPVSGGWDTS
TWGLNSSTEPQSPPTASQAITKPVRRTVVDESENFFSAFLSPSDVQTIQKSPVVSKPPAK
SQRPEEEVKSSLQESSSSGQSRASETAESEVGDSVCVSGETPAVGTPSPVPEDKHEETAS
EESEVKVPTVGLKVSENVVNVNPTKDVSTTATQSLTAETKDMALEPKEQKHEDRQSNTPS
PPVSSFSSGTSTTSDIEVLDHESVISESSASSRQETSDAKSSLHLMQTSFQLLSASACPE
YGRLDDFQKLNESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELPGKGYALVPIVVSPS
APKTKAVESTEENAEEEEGNETLIAPSEEAELEESGRSATPVNCEQPDTLASPTPVNGGD
SASGPAAEQCEAAENQLKPPPEKEDICKTVEFLNEKLEKRETQLLSLSKEKALLEEAYDN
LKDEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEMKTIKEELATRLNS
SQTADLLKEKDEQIQGLMEEGEKLSKQQLHNSNIIKKLRAKDKDNENVIAKLNRKAKELE
EELQHLRQVLDGKEEVEKQHRENIKKLNSVVERQEKDLGRLQVDMDELEEKSRSTQAALD
SAYRELTDLHKANAAKDSEVQEAALRREMKAKEELSGALEKAQEEARQQQEALALQVGDL
RLALQRAEQAAARKEDYLRHEISELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQAT
LGSQTSSWETLEKNLSDRLGESQTLLAAAVERERAATEELLANKIQMSSVESQNALLRQE
NSRLQAQLESEKNKLRKLEDENSRYQVELENLKDEYVRTLEETRKEKTLLSSQLEMERMK
VEQERKKTIFTQEALKEKDHKPFSVSSTPTMSRSSSISGVDAAGLQASFLSQDEFHDHSF
GPMSTSASGSNLYEAVRMGAGSSIIENLQSQLKLREGEISHLQLEISNLEKTRSIMSEEL
VKLTNQNDELEEKVKEIPKLRVQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYK
TQIDELLRQRLS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaatgcctcgcagttgtccagcttcgccaagcaggccctgtcccaggcc
cagaagtccatcgacagggtcctggacatccaggaggaggagccgagcgcctgggccgag
gccatcccgtacggcgaaccgggaataagtccccctgtgagtggaggatgggatacttca
acctggggattgaactcaagcactgagcctcagagcccaccaacagcctctcaagcaatt
acaaagccagttcgaaggactgtagtagatgaatctgaaaatttcttcagtgcctttctc
tctccatcggatgtccagaccattcagaagagtccagtggtatcgaaacctccagctaaa
tcacagcggccagaagaagaagtgaaaagcagtttacaagaatcgtcatcttctggccag
tctagagcttctgagacagctgagtctgaagtgggagattctgtgtgtgtttcaggagag
actccagctgtgggtactccctcacctgtacctgaagacaagcatgaagaaactgccagt
gaagagtctgaggtgaaggtgcccactgtgggattgaaggtgtctgagaatgtagttaac
gtaaacccaacaaaagatgtatctaccacagccactcagtctcttacagcagaaactaag
gatatggctttggaacctaaagagcaaaagcacgaagacagacagagcaacacaccttct
cctcctgtcagctccttctcgtcgggcacttccaccactagtgacattgaagttttagat
cacgaaagtgtgataagtgagagctcagctagttcaaggcaagagacttcggatgcaaag
tcaagtcttcacctcatgcagacatcctttcagcttctctctgcatctgcttgtcctgag
tatggccgcttagatgacttccaaaagctcaatgagagctgctgctcgtcggacgctttt
gaaagaatagactcgtttagtgtgcagtctctggatagccggagtgtaagtgaaatcaac
tcagacgacgaactgccaggcaaaggctatgctttagtacctatagtagtgagtccttca
gccccaaagactaaagcagtagaatctactgaagagaatgctgaagaagaggaaggaaac
gagacattaattgcaccttctgaggaagcagaattagaggaaagtggccgaagtgctact
ccagttaactgtgaacagccagatacattggcttctcctacaccagtaaatggcggggac
tctgcctctggaccagctgctgagcagtgtgaagctgctgaaaaccagctgaaaccacca
ccagagaaagaagatatttgcaagacagttgaatttctgaatgagaagctagaaaagagg
gaaactcagttattgtcccttagtaaagaaaaggcacttctagaggaagcttatgataac
ctgaaggatgaaatgttcagagttaaagaagaaagtagtagcatttcttctctgaaagat
gaatttacccagagaattgcagaagcagaaaagaaagttcaactagcctgcaaagagaga
gatgctgctaagaaggaaatgaaaaccataaaggaagaacttgccactagattaaatagt
agtcaaactgcagaccttttgaaggaaaaagatgaacagattcaaggtttaatggaagaa
ggagaaaaactttcaaagcagcagctgcataattccaacatcattaagaaattaagagct
aaagataaagacaatgaaaatgttattgcaaagctgaacagaaaagctaaggagctggaa
gaggagttacagcatttaagacaggtccttgatggcaaagaggaggttgagaaacaacat
agagaaaatattaaaaaactaaattctgtggtagaacgccaggagaaagatcttggccga
cttcaagtagacatggatgaacttgaagagaagagccgaagtactcaggcggccctagat
agtgcatacagagaacttaccgatcttcacaaagccaatgctgctaaggatagtgaggta
caggaagctgctctgaggcgtgagatgaaggctaaagaagaactttctggggcactggag
aaggcccaggaagaagcccgtcagcagcaagaggcattagcacttcaggtgggggacctg
aggctagcgctgcaacgagcagagcaggcagctgccagaaaagaggactacttacgccat
gagatcagtgaacttcagcagagactccaagaagcagagaatcgaaaccaagagctaagt
caaagtgtttcatcaacaacaagaccgttgcttcgacagatagaaaatttacaagcaact
ctaggatcccagacatcatcatgggagacgctagagaagaatctttctgataggcttggt
gaatcacagaccttgttggctgcagcagttgaaagagaacgtgcagctacagaagaactc
ctggccaacaaaatccagatgtcttcagtggagtcacagaatgcgctattacgacaggaa
aacagtagacttcaggcccagctagagtcagagaaaaataaactgagaaaactagaggat
gaaaatagtcggtaccaggttgaattagaaaacctaaaagatgaatatgtaagaacgctt
gaagagacaaggaaagaaaagacacttttgagcagtcagttagaaatggaaagaatgaaa
gttgaacaagaaaggaagaaaaccattttcactcaagaagcactaaaagaaaaggaccac
aagccattttctgtttctagcactcccaccatgtcacgctccagctctataagtggcgta
gatgctgcagggctgcaagcatccttcctgtctcaggatgagtttcacgatcattcattt
gggccaatgtctacatcagccagtggaagcaatctttatgaagctgtaaggatgggagcc
ggatcaagcattattgaaaatctgcagtctcagctaaagctgagggagggagaaattagt
catttacagctagaaattagtaacctagaaaaaactcgatccataatgtctgaagagcta
gttaaattaacaaatcagaatgatgaacttgaggagaaagtgaaagagattcccaagctc
cgagttcagctgcgtgatttggatcaaagatacaacactattctgcagatgtatggagaa
aaagcagaagaagcagaggaacttcgcctagatcttgaagatgtaaaaaatatgtataaa
actcaaatagatgaacttctaagacaaaggctcagttaa
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integrated database retrieval system
